Detailed information on ENST00000425156

lncRNA-RNA interactions

Number of interactions: 9

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000338983 Mitogen-activated protein kinase kinase kinase MLT protein coding ENST00000425156 545 307 UTR3 Trans
ENST00000463899 N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase) processed transcript ENST00000425156 518 287 noncoding Trans
ENST00000549365 DNA-damage regulated autophagy modulator 1 nonsense mediated decay ENST00000425156 503 264 CDS_UTR Trans
ENST00000607772 CNKSR family member 3 protein coding ENST00000425156 586 303 UTR3 Trans
TCONS_00037377 NAD synthetase 1 novel protein coding ENST00000425156 552 303 UTR3 Trans
TCONS_00124891 zinc finger protein 540 novel protein coding ENST00000425156 606 322 UTR5 Trans
TCONS_00222403 protein tyrosine phosphatase, non-receptor type 12 novel protein coding ENST00000425156 618 315 UTR5 Trans
TCONS_00243503 proprotein convertase subtilisin/kexin type 5 novel protein coding ENST00000425156 529 298 UTR3 Trans
TCONS_00243507 proprotein convertase subtilisin/kexin type 5 novel protein coding ENST00000425156 529 298 UTR3 Trans

Sequence

>TCONS_00243507 (2035 nt)
ATCAAGATGGCCGCCTGGGACCGCTCTCAGCCCCTTCGGCCTCTACCTGAAGAGCCACGCCCCGTCTGCTACACCCAACTGATTGGTTCCTCAATCACAG
AGAGGAAAGGCAACATGAGGATGACGTCAGTTACAAATATGGCGTTTTGGACGGGCTCGATAGTTTGCTTGGCCTCTACTCAAGGAATGCTGATGGTATA
GCAAGAAGGTATTCTGAGCATTATATCAATGGGGAAGTTCTAGATCTTTTGCAAAGCAGGAGAGTCATCCTAGGGCATCCAGAGGCCTTCAGGGTGGCCT
GAAGTCTCCCACCGCACCACCTTTGGGTTAACCTAGCCTGTCCCACAGAAGATGATGAAGTTGGGTCTGGAGGCAAGCTGACTCAGATGGATTCTCGATT
TTATGATGCTGGACTGGAGATGGGTTTCACCATGTTGCCCAAGCTAGTCTCGAACTCGTGGACTCAAGCAATCCACCTGCCTCAGCCTCCCAAAGTGCCT
TACAGGCGTGAGCCACCGCACCTGGCTGAACTGGTAAATCTTTGATAGCTATCTGCAACTCTTGGTTACAAATTTTAGCTTTGAAGTCAGAAGTCAAAGC
AAGACTACACAGTCCTTGGAGAAGGTGTCAGTCACTACCCTCAATTTGTAGCCTCAAATATCACAAACCCAGCATGTCCAGACCTTCTCCCTTGCGTCTT
ACACTAACTTCTCCTGGCTTCAGCCAGAGATGGGGGGAAAGGATTTTCTGCTCTTCTAACTCATGGTTTTGGAATAATTGATTTCTTCCCCTTTATGCTC
ATTTCTTCCCTTTGTTGCCAGTCCCTTCACACTTACCTTCAGTCCTGGAGGGAGGACCTCTTGCTTGTGGATCTGGATGACAGTGATACTCACAAGTACC
ACAATACTCACAAGCAAGACCACCAAGGCAATGATGGTTGGAGTTCGGTAGAGGGCCTTGAGGCCTAAAATGAGAAGACCCAGAAGACACTTGAGGGGGA
GGTAAAAACCAGGCACTGGTATTCTTTGTAGAATTGATGGACTGGCCCCATAATCAGGTGCATAAACCACCTTCTCTGGTGTTAGCGAGACCCACACTTC
TAAGATGGAGTAGCAAATAAGCTCCCCTTCTCCCCAGTTTTGGGGAAGCACAAACAATACCTATTTGCCCTTCCTCACAAATTGTGTACTAAAACAGTGT
TGCAGGGAGGGTATGCATGGTCTAGTTTTCTGATATTTTGGTTATCCCTGAGATGAATTACAATAACATTTGTTTTACTTTTTTCTTTTTCTTTTCTTTT
TTTTTTTTTTTGAGATGGAGTCTCACTCTATCGCCCAGGTTAGAGTGCTGTGCCGTGATCTTGGCTCACTGCAGCTTCCAACTCCCAGGTTCAAGCGATT
CTTCTGCCTCTGCCTCCTGAATAGCTGAGATTACAGGTGCCTGCTACCACGGCAGCCAATTTTTGTATTTTTAATAGAGACAGGGTTTCACCATGTTGGC
CAGGCTGGTCTCGAACTCCTGGGCTCAAGTGATCTGCCTGTCTCGGTCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCACGCCCAGCTAACATTAG
TTTTAATGGAGATTCAAAAAATCTATTTTTAAAAAATTAAACCAGGTGATAGAATATTTCACTTAAAAATAATCTCATAGAATATTTCATTTAAAAATAA
TCTCAGTTAAAGAAAAAGAAATTAGGCTGGGCAGATGGCTGACCCCTGTAATCCCAGCACTTTGGGAGGCCGAAGTGGGTGGATCACTTGAGGTCAGGAG
TTCAAGACCAGCCTGGCCAATATGGTGAAACCATGTCTCTACCAAGAAATACAAAAATTAGCCAGGTGTGATCATATGCGCCTGTAGTCCCAGCTACTCG
GGAGACTGAGGTGGGAGAATTGCTTGAAGCCAGGAGGTGGAGGTTGCAATGAGTTGAGATCAAACTACTACACACCAGCCTGGGTGACAGAATAAGACCT
TGTCTCAATAAAATAAAATAAAAATAAAAAAATTAG

Expression



Full and truncated open reading frames discovered in TCONS_00243507

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.