Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
---|---|---|---|---|---|---|---|---|
ENST00000233154 | NCK adaptor protein 2 | protein coding | ENST00000427050 | 1402 | 477 | CDS_UTR | Cis | |
ENST00000393348 | NCK adaptor protein 2 | protein coding | ENST00000427050 | 1402 | 477 | CDS_UTR | Cis | |
ENST00000425756 | NCK adaptor protein 2 | protein coding | ENST00000427050 | 1394 | 474 | CDS_UTR | Cis | |
ENST00000451463 | NCK adaptor protein 2 | protein coding | ENST00000427050 | 1402 | 477 | CDS_UTR | Cis | |
ENST00000522586 | NCK adaptor protein 2 | protein coding | ENST00000427050 | 1394 | 474 | CDS_UTR | Cis | |
TCONS_00140729 | NCK adaptor protein 2 | novel protein coding | ENST00000427050 | 1402 | 477 | UTR5 | Cis | |
TCONS_00140732 | NCK adaptor protein 2 | novel protein coding | ENST00000427050 | 1402 | 477 | UTR3 | Cis |
>TCONS_00140732 (892 nt)
AAAACTGAGGAAGAAAACTGACAAGGTTTTCAAGGGAATTTCCAGGCTGAGAATCTACGATGGCCAGTGAGCTGGTATGATTCATACGAAGTTCCATGTC
TCACTTATCTCTCCAAATCATGGTTCTTCACGAGGGAGCCCTTCTTCAGGCTGTTCTTCCGCTCCACGTAGTTGGACGGTACATAGCCCGTCCTGTTGGC
CGCGTTCCTCACCCGCCACCACGTCTTGGAGTCGTCCAGCAACCACAGCCGCTCGTTCTTCTTGATGTCCAGCTCCTGGTCCTGCTGGGCGGTGTAGTCC
CACTTGGCTATCACAATAACTTCTTCTGTCATCTTTCATGGAGTCCTTCTGCCAGCAAAACATTTGGAGATGCTCATTAGAGAACTACCCGGACACTTCA
TCCTTTGCACCAACTTGAAAAATTAGGCACTGACAGCTTTTATTACAACTCTGCAACCAGTTTTCTCCTGGGTCTTGAAATGCTCAACTTTAAAATGACC
TTCTTTCAACAAGCTTTAGTATTTGGTTTAGAAACAGCAACCTTATAAAACAAATCTTATGTTACTGTTTGCTGTACATGGGGAAATCTGACCCTCTAAC
AAAAACAAACTTGAAAAAAATTCTAAATAACATTATAATTAAATGAGTCCATTTCATTAAGTAACACTGCCTCCTGATAACTGTTAGGTTGACACTCATT
TTCTCAGGATATGCTGTGTCTTATAAACATATTTAATAAGTCAACATAACCAAACTACTCCTATAAATTAAAATTAACATTGTACTAATAACAAGGTGGT
ATCCTGGATTGGATCATGAAACAGAAAAAGAAAATTAATGGAAATACTGGTGAAATCAAAATAAAGTCTAAGAATAATAATAACAATAAATAA
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.