Detailed information on ENST00000428597

lncRNA-RNA interactions

Number of interactions: 4

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00218556 interleukin 20 receptor, alpha novel protein coding ENST00000428597 510 268 UTR3 Trans
TCONS_00218558 interleukin 20 receptor, alpha novel protein coding ENST00000428597 510 268 UTR3 Trans
TCONS_00218562 interleukin 20 receptor, alpha novel protein coding ENST00000428597 510 268 UTR3 Trans
TCONS_00218568 interleukin 20 receptor, alpha novel protein coding ENST00000428597 510 268 UTR3 Trans

Sequence

>TCONS_00218568 (3834 nt)
AGCTACATCCGTCACCTGACACGGCCCTACCAGGAACAGCCGCGCTCCCGCGGATTCTGGTGCTGCTCGCGTCCCCGCTCCCCTATTCCCCTTATTTTAT
TCCTGGCTCCCCTCGTCGAAAGTCTTCCATTCTTCAAACTAGATTATTTAAAAATGAAAAAGGAAGAAAGGAAAGCGAGGTCATCTCATTGCTCTATCCG
CCAATCAGGAGGCTGAATGTCAGTTTTGAACTAAAAGCCGCTCCGCTCCTCTTCTAGATTTGGAAAACAAGCGAAATTAAACTAAACCGCTGCACGCCTC
TGACGCGACATCTGGACACGGCGCGGCGCTGGCGCTGCCGGAGCTGTCGACCCGGCCTGGCGCCGGACTAGGACTATTTGCCACGACATTTCAAAGGATT
CCAAGAGAGAATATTGGTGTCCATGCTGTGATGATTCCTCAGCTCCTCTCATCTGATCTCCGTCCTGGCCCCCATGACTTTCTTTGTGGTAGTTAGGGTG
TGGTATGTGCCACTGAGGCCCACACCTATTGCTGCAATTTATAGCACTGATCTGTCATCAATACCACTTGCTGTCTTGGATGTGAAGATGATTTTTCCTG
CAGGGATTCCCTCTACAAAATTAAAAACACTGGGCATGTGGAAATAATATTCATGCTTTAAATTGTCTTTTCTCTTCACTACACCAGGGGTCCCCAACCC
CTAGGCCACAGACTGTGGCCCTAGTGTAGTGAATAGAAAAGACAATTTAAAGCGTGAATATTATTTCCTCATGCCCAGTGTTTTTAATTTTGTACTGGTC
TGTGGCTTGTTAGAAACCAGGCTGCACAGCAGAAGGTGGGCAGCAGATATTGAGAAACCACAGAAAGAGAGAAGTTAAATAATTTTCCTGTCAAAGACCA
CATCAATGATGAAGCCAGAATTTGAGCTCATGTACTTAACCACTGGACTACCTGCCTGCCCTGTCGAGGAACAGCTAAGTGTCCCTTTTGATGAGAAGAA
TAAGCCTCATTCTGATTCAACAGCAGAGATCAAAGAAAAGACTTCTGTTTTCTGGCCACCAGATATATGTTATCTGTGCTTAAAGAATTGAAAAACACAC
ATCAAAGGAGAATTTTCTTGGAAAGAGAGGGTTCAAGCATCACTGTTAGGTGTGCTGGAATCCTTTCCCGAGTCAGTACTGCTTTCTAGAAGAAAACCGG
GGAGATCTATTTGGAATGTATCTAACTCCAAAGAAACCATCAGAGGTAACAGTAGAGACGGGGTTTCACCATGTTGGCCAGACTGGTCTTGAACTCTCGA
CCTCGTGATTCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGACACCACACCCGGCGGATAGAGAGAATTTTGACAGTCTCTCCAATGA
ACGCCTTCACTGATATCCAAAGCATGAAGGACACACCAGGGAAAAACATAGACCTAACACAGGACAAATGGAATTATTAGAAACATTTTCTAGCAGAAGA
ACACTATTCTGTTGCCATTTGAATCTTTGCTTCTTTCTAGGTTTGACAATGAGCCTATCATATAAGCCCAAATGTAAACAGAAAGAGGTTGAATCAGTCA
CGATAAGCCCAATTATGCTGTGGTAACAAACAACCTCAAAATCTCATTGGCTTAAAATATACAGAATTATTCTTACTCATGGCACATATCCATCTATCAT
CTGCAGGGGATCTGCTCACTGAAGTCACTTAGGAACTTGGACTGATGGAACGGCCACTTTTTGGTCACTATATGTATTAATCTGTTTTAATCCTGCTGAT
AAAGACCCAAAATTGGGAACAAAAAGAAGTTTAACTAGACTTACAGTTCCGCATGGCTGAGGAGGCCTCAGAATCATGGTGGGAGGCGAAAGGCACTTCT
TACATGGTGGCAGCAAGAGAAAAATGAGGAAGAAGCAAAAGCGGAAACCTCTGATAAACCCATCAGATCTTATGAGACTTATTCCACTATCAAGAGAATA
GCATGGGAAAGACTGGCTCCCATAATTTACCTCCCTCTGGGTCCCTCCCTCAACATGTGGGAATTCTGGGAGAAACAATTCAAGATATGACACATTCATA
ATTTAAACAGAAGCCTACGAAGAACTCATAAATTAAAAGAAGATAATCTTTTCACAAGGTGATGGAGGCTTTTTATTTTGCCACAAAACCACTGGTGACG
TTGCCTGTGGCCACCTTGGAGAAGACACTGGAGGCCTGGGACATGGAGACTGCTTTTCTGCAGAAACCACATCCCTTGGAGTAATGAGCTACACCTACCT
CAATTATTCAGTGCAGTACAACACTCCAGACAGGGTCTCACTCTGTCACCCAGGCTGGAGTGTATTGGCATGATTACAGCTCACTGCAACCTTGAACTCC
CAGGCTCAAACCTGAGCAGCTGGGACTACAGATGCACCACCATGCATGGTACCAGAGATATAATAATGAGAAACAGACATGCTCCCTCCCCTCATTGAGG
TTACAGCTTAGTGTGGAGACACACAGATGCCTAACGCACTATGGTATGGAAGGTGCTATGGACACAGTGCTCAAATCCATGATCTACATAGGTGGAGAAC
TTCAGTAGAGGAAGTGGCAGGAATTTGGGAATGAGGAGCACAGTGATTAAACTGGGGCCATTCATATGAGAGTTTAAGAACTCAGACCAGTGACTTAGAT
TGGCTTCTCTCACATGGCAAGAAACATTGCTGCTAGCACTTCCCGAGTTCTACGTTCTACAACATCCACCACTGGATCTTAACATAGACGTAAGATCAAA
TGCAATAGCATGTCAAACAATGTGTAACTCCAGTTATACAAACATTACTGTATCTCATTGGGGATACGAAGCTCTACACACTTGAAGATGGTGAAGGAAT
ATAAAAATCTATGTCTCACAGTCCAGACTTGGAGTACAAGTAATAAGAAGAATAAAACTTAATCCCTTAAGTAGATTCACCATAAGTTAGCTCAGAGCAA
TTCCAGTGCAAGTATGGTCTGTGATCCAGTAGTATCTTACAGACAGCAAGTTGAACATTGTGGGATGCATGAGCTATTGAGGCCTTTGCAGCTTTCTGCT
ACATGGAGGCTAGGGCCAGAGTCAAGATTTATGCTTTGCAGCACACTGGTCAGCTGTTTTTGCAAATCAGATTAAATGATTTTTAAATGAGGCTGAGAGC
ATGGGAGATACTAATGTGTGTTTCCTTGTGAGCTACTGCATAAGTTAGGAAATTGAAATACAGAAAGATGAAAAGTGATTTGCCCAAGCATATAGATCAA
AGCTGTGGCAGAACCAGGACTGGAACCTATATCTCTCTACTAATGGTTTTTTTAAAAAAATAACCTTGTTTCAAAAATATTAAAAAGTCACAAGAAAGGT
AAACATGTGGATAAACAAAATGAAGAAAATAAAAATTATCCAGTAATAACATATTGGCATATGTCTTTCTGGTATATTTTCCTGTGTTGTCATCATTATC
ATCTCCATCATCATTATATCCATCATTATCATCATCATCATCATCATCATCATCATTATCATCACCATAGTGAACATGTAATGCTTACCTAGTGCCAGAT
GCTGTCTAGGCATTTTACATGTGTTACTGGTAACTCATGTAATCCTCATAACAACCTTATAAGGTGGTTGCTATTATCCCCATGTTACATATGAAGAGAC
AGAAGCATAAAGAAGTTGCACCGCTGGTAATTGGCTGGGATTTGAACTTAAGCAGTCTAACCTTAGAGTAATGATTTTAACAACTATGCTATATACATAC
AAATTTACAAAATAAAACTGGGCTCAGACAATAAA

Expression



Full and truncated open reading frames discovered in TCONS_00218568

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.