Detailed information on ENST00000430391

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000263955 serine/threonine kinase 17b protein coding ENST00000430391 526 286 UTR3 Trans
TCONS_00153158 serine/threonine kinase 17b novel protein coding ENST00000430391 526 286 UTR3 Trans

Sequence

>ENST00000430391 (781 nt)
GTTACTGGACCTCAGATACTAAAAGGACAAAGAAAAGGGACAGATGAGAACAGCTACGAAGCGATAGTGAAAACATATGGTGTCCATCTTGTAAGCATAA<br />GGCTCCCTGGTATTGCTGCCACTCTCCCTGTGCTCGGGAAAGCTGGAAGAAGCCAGTAGGCAATCTGGTGTCTCGTCAGAAGAGTGCCAGAAACAGGTGT<br />TGCTGACCTAACCCTTTCCTCCTACCACAGATTCTCTTGGTGGCCAGGCGCAGTGGCTCACGCTTGTAATCCCAGCACTTTGGAAGATGGAGACGGGCAG<br />ATTACCTGAGGTCAGGAGTTCAAGACCAGCCTGGTCAACATGGCAAAACCCCGTCTCTACTAAAAATGCAAAAATTAGCCAGATGTGGTGGTGCTCACCT<br />GTAGTCCAAGCTACTCAGGAGGCTGACACAGAAGAATTGCTTGAACCCGGGAGGCGGAAGTTTCAGTGAGCCGAGATCGCGCCACTGCATGCACTCCAGC<br />CTGGGCAACAGAGCAAGACTCCGTCTCAAAAATAAATAAATAAATAAATAAATAAATAAATAAAATGTTTCAGGTTCTCTCTTGTCTCCAAACCATTGCT<br />AATGCTATTTCCATGTCTGATGTTCCAAGGAAAATATTATTTCCTCTAGAAAGCCCGACTGCCTCTCAGATTTGTTAGGTGCTTTCCTACTGCACCCTGT<br />CAGAGCACAAAATGGTAATCGCAGTTTGTCTGTCCCCCTTATTAGTCTTTAAGCGAATTAGACTTTAAATTCTAAAAGCAG

Expression



Full and truncated open reading frames discovered in ENST00000430391

In silico ORF/peptide predictions
>peptide 1 (60 aa)
METGRLPEVRSSRPAWSTWQNPVSTKNAKISQMWWCSPVVQATQEADTEELLEPGRRKFQ

>peptide 2 (52 aa)
VTGPQILKGQRKGTDENSYEAIVKTYGVHLVSIRLPGIAATLPVLGKAGRSQ


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT081190 (Evalue: 0)

Best hit to Swiss-Prot:
sp|Q8N2A0|CX062_HUMAN (Evalue: 3.0E-18)