Detailed information on ENST00000434560

lncRNA-RNA interactions

Number of interactions: 7

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000511184 E74-like factor 2 (ets domain transcript... nonsense mediated decay ENST00000434560 512 299 CDS_UTR Trans
ENST00000568559 transmembrane protein 170A nonsense mediated decay ENST00000434560 558 283 UTR3 Trans
TCONS_00030130 calcium/calmodulin-dependent protein kin... novel protein coding ENST00000434560 633 282 UTR3 Trans
TCONS_00067572 DCN1, defective in cullin neddylation 1,... novel protein coding ENST00000434560 638 298 UTR3 Trans
TCONS_00160558 cerebellin 4 precursor novel protein coding ENST00000434560 531 293 UTR3 Trans
TCONS_00161618 interferon gamma receptor 2 (interferon ... novel protein coding ENST00000434560 535 297 UTR3 Trans
TCONS_00238831 cytochrome P450, family 7, subfamily B, ... novel protein coding ENST00000434560 565 293 UTR3 Trans

Sequence

>ENST00000434560 (1828 nt)
TGTGTGTGTGTGTGTGTGTGTGTTTGTGAACACAACATACCTGTATGGTAGGGGTAACATTGGTTTAGATTCACTTTGTACTTCATACCTGTGTTCAAAA<br />GACTCAGCTGAGCCCTTTGTGAGGATATTTTGACTTTGAAAATCTGGAATTGATGACTCACTTAAAATAGTTTTATCTTGGGACTGAAACAGGGACATAG<br />GCATATTTTTGTATGATTCACATCAGAGCTGATAATCTTAATGGTTTGTAAAGGGCCTAAATGATTCTACAGTTTTATATAAAGCATGTTAAACTATCAA<br />GGCTCATTATTACATAACTATAAATGGACAGAGTTTTATAATAAGAAAAATGTACATTTGTTTAGCCATTGTCTCCTAGGAACTTCTCTCTATTATTACA<br />CTATTGCATTTGCAAAGGCACCAAAGGTGCAGTTTGGTTTATATACTGCAGTAGTAATTCCTAAAAGATTTAATTGTATCAGGTTTTTTAACTTAAAAAT<br />GGAATCCTATTTAAAGTATATCCAAATATTCGTACAATAAGAAGTTATCACAGTCTACCTATTTTGTAAATGAGGTGCAGTGTTTAGTTTTCATTGGGGT<br />TTTTGATTTTCTGTTTTGAGCATTTAAAACAAAATCCTTTGAAAATAGTAGTTGGTGATCACAATGGTTTATGACAATTTTAACAAATTGTATTAGAAGA<br />CTCTAAGGAGCTGTATTTTCAACCGTGCTTTTTCTCTTCCTTCCTTCCTTTCTCTTCCCTCACTTTTTTTCTTCCTCTTCCTTCCTTCCTTCCTTCCTTT<br />TTGCATTGGGGTAAGAACATAAATAATATTACATCTTTCCACTATGTCTAAAAAAGTTGGAGGTGGAGAACAGTATATTTTCCATGAAAATGTCAGCCTG<br />CCACATAGCTCTGCTTAGTAGGCAAACCGTTATTCATTTGGATTCTCTCTTGGCTTTACATTTGGAAACAGTTTTAGTGTTAGGTACTTATGATTGAAAA<br />GGAGATCTCATGTTGAGCTTTTATTGCGTTGGATGCGCTTAAAGGAGGTTTTGTAAAAGACCATTGCTTCATTAAGAAAGGAAGAAAGAAAAACAAACAA<br />TTACATCCAGGGAAATGCTAGGATTTTTGATAGTTTAACATGACCATGTCTTGAGCATTTTCAGTTCATAATGAGGCTTGCCCTAACTAAAATGGCATTT<br />CATTTCGGTTGATGTACTCTTGACATTATTGGTGACATCTGCTAAATTCTAAACCATATTTTTTTTTAAATTGATTTCATTCCTACATCATCAGCTATGA<br />CCACCAGTTGAGCTGGAGAGATTGGAATCTGGTGTTTTATTTATTAAAAAAGACATTTTCAGACTGCTTAGCTCACAAAGATATTTTGTATTCTTTTTCA<br />AAATATATTTTATTTATCATGGATGCTTGTGTTTTAAGGCTGCATATTTATTTAAAATTTATGAAGAACCCTGGAAAACATTCCCAACACAATACAAAGT<br />CCACACATTTGCACAATAATTAAGAATATTTGGCCGAGCACGATGGCTCATGCTTGTAATTCCAGCACTTTAGGAAGCCGAGGTGGGCGGATCACTTGAG<br />GTCTGGAGTTAGAGACCAGACTGGCCAACATGGTGAAACCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGTGGGTGCCTGTAATCCCAGC<br />TACTCGGAAGGCTGAGGCAGGACAACTGCCTGAACTTGAGAGGTAGAGGTTGCAGTGAGCCGAGATCACACCATTGCACTCCAGCCTGGGTGACGCAGCA<br />AGACTCCATCTCAAAAAAAAAAAAAAAA

Expression



Full and truncated open reading frames discovered in ENST00000434560

In silico ORF/peptide predictions
>peptide 1 (84 aa)
MLNYQGSLLHNYKWTEFYNKKNVHLFSHCLLGTSLYYYTIAFAKAPKVQFGLYTAVVIPKRFNCIRFFNLKMESYLKYIQIFVQ


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT114865 (Evalue: 0)

Best hit to Swiss-Prot:
sp|Q6B4Z3|UTY_PANTR (Evalue: 2.0E-20)