Detailed information on ENST00000434849

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000604000 Lix1 homolog (chicken) like protein coding ENST00000434849 503 300 UTR3 Trans

Sequence

>ENST00000604000 (2368 nt)
TGTTACTTCTGTCAGAGCTGAACTTGAAATTGCCATCTCATTTTTGGAGACCTACAGTTGAATATTTGCATATCTCTGGAATGGTGTCTTAGTCTGTTTT
GTGCTACTATAACAGAAGACCACAGACTGAGTCATTTATAAGAGCAGAAAATTTATTTGGCTCATGGAGCAGCCTAGAACCCTACTATTAGGTCTGAGTC
AGTCAGATGGAAAGAAGGCGAAGTAGAAGCATCGAGGTCGAATCAGTCACACATGGACTTCCCTAGTGGACTCATTGAAAACCAGACCTTCTGAGCCACC
CTTGGTAGGGGCTCTGGAAGTGGCTTCTGAAGAGACCCCATTCTGCACCTCCACCAAGGGCCTGGTGGGAGAAGTGTGCCCTGCAGTGCCCTCAGAAAGG
CCCACTGAAACTGCAAACATTCCCTTTCTGCACTGCCATTTGGTTCATGAAGACATATGGCTGGGAGAAGTTGAGTATCCTATGTCACCTTTTAGTCCAA
CAATTTTATGGAGGCTTAGCATGGGCAGGCCTGGTGCCAGGTGATGAGGATGCACATGGGAGCAGATCTGGCCCTGCACATAGGAGCCCACATTTCTGGA
TAGTGGGGCGGAGGTGACACATGTCCACATAACTGCAGTGTACAGAGATAGCAAAACAGTAAGATACAGGATGATTGAAGGTCTGTCTGTAGCTCATCCA
AATGATATGGTGACCAGTTCCCAAGAGGAATCTCTACACGTTTCCTGCTATTGAGCCTATGGAGCGTGATAAAAGAAATCTGGGCTGGGTGTGGTGGCTC
ACGCCTGTAATCCCACCACTTTGGGAGGCTGAGGTGGGTGGATCACCTGAGGTCAGGAATTCTAGACCAGCCTGGCCAACATGACAAAACCCCTTCTCTA
CTAAAAATACAAAAAATTAGCCAGGCATGGTGGCAGATGCCTGTAATCCCAGCTATTTGGGAGGCTGAGGCAGGTGCCATCCCAGCCAACATGGCACCAT
CCCAGCCAGCATGGTGCTATCCCAGAAAATATGGCACCATTCTAACCAACATGGCACCACCCCAGCCTCAGGTATTCCTTTATAGCAATACGAATGGACT
AAGACACTGGCATAGCAATAACACTAATAAATATATATTGACTGAATGAAAGAACAAACATGTTATCTTTCTGAAAGAATATATTTTTTGGCCAGGCTTG
GTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCAT
CTCTACTAAAAACACACACAAAAAAAATTAGCCGGGCATGGTGGCAAGCATCTGTAGTCCCAGCTACTAGGGAAGCTGAGGCAGGAGAATGGTGTAAGCT
TGCAGTGAGCAGAGATGGGCTTACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCGTCTCAAAAAAAGAAAAAGAAGAATGTATTTTTTACAACACAA
TCAAATCAATGCCTTAAAACTAGGCTGTCATCACATTTTTCCCCCCGTTTTACATACTTAAATTGGCTAAATCAAGAATAGGGGCTGGCTCTCAGTCCCT
ACCTCGTGGGGGGTGCCTCCCCTCCCTGCGATGGGGGTCCTAAGAGCCTGGGGCGGAAGAGGGGCTGGCTCTCAGCCACCACAAAATGGGGAGCCTTTAT
GTTCAGGTTTTGCCCAAGAGTCAGCTTATTTGCTTCTGGTACTAGCAGGGCAGTTGATGCCGTGGCCTTCAAACATGGGGGCCATCCTTTAGAAACCCTT
TCTATTTGTTTAGACACGTAGGCCACCGGCCTCAGCCAGGGCCCCAGAGTTTCGGTTAAAATTCCAGCTGCCATCTTTTCTCTATCTGACGCATTCAATG
GAAAAGGCTTTGTCAGATCTGGTAGCCCCGGGGCTGGGGCTGCCAGAAGTTTTTCCTTTAACTCATGAAAGACTTGCTGTTGTTGGGATCCCCATTCTAA
AGGTTCCCGGTCCCCGCCCCCTTTGTGACCTCATACAAAGACTTGGCTAATACTGCAAAGTTTGGGATGCACAGTCTACAAAACCCCACAGCCCCTAAGA
ATTCCCTCACCTGCCTTCTGCCCTTAGGCTCCGGTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCGTTTGGACCCCTGTCTTGGACCGCTGTC
GGATAGTAAATCCCAAGTAAGGTACCTGCCGTCGGCAGATTTGAGCTTTCTTCTTGGACACCTAATACCCAGAGTCCTCCAGGCTCCGGTAGATTGCAAA
TGACCTGCTTTCTTTCTGTTCCCGGGCGGCATCGGACCCGTCGGAGAGTAAATCCCAAGTAAGGTACCT

Expression



Full and truncated open reading frames discovered in ENST00000604000

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.