Detailed information on ENST00000446028

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00148698 WD repeat containing planar cell polarity effector novel noncoding ENST00000446028 643 354 noncoding Trans
TCONS_00148698 WD repeat containing planar cell polarity effector novel noncoding ENST00000446028 846 472 noncoding Trans

Sequence

>TCONS_00148698 (712 nt)
ACACAACGAAGGAGAGGAAGAAGGGAGGAAGGCACTTCACAAGCAGAGCTGAGCCAGCAGGGCAGCAAGGCAGAAAGGGACTGAGATTGTACCTGGAAGT
ATCCCAGTGGCTGGATATTCAAGATCATTATGTCCATGCCAGAGAAATCAAGTTATACCACCACTTCTTGGCCTTTTGCCTAAGATCAAGTGTAGAAATC
AAGTTAAACCAAACCAAGTGAGGATTTCAGTTATTTCTCTGAAAAGCTGGAAGTAGTCTCTTTGAAAACCAGTACAAGATAAGGATGCCCTTTCTTTCCA
CTCCTATTCAACATAGTATTAGAAGTTCTGGCCAGGACAATCAGGCAAGAGAAAGAAATAAAGGGTATTTAATTAGGAAGAGAGGAAGTCTAGTTGTCTC
TGTTTGCAGACGACATGATTGTATATTTAGAAAGCCCCATCATCTCAGCCCAAAAACTTCTTGAACTGATAAGCAACTTCATCAAAGTCTCAGGATCTAA
AATCAATGTGCAAGAATCACAAGGATTTATTTACATCAACAATAGGCAAGCAGAAAGCCAAATCATAGGTGAACTCCCATTTATAATTGCTACAGAGAGA
ATAAAGTACCTAAGAATACAGCTAAAAAGGGACATGAAGGACCTCTTCAGGGAGAACTACAAAACACTGGTCAAAGATATAAGAGAGGACACAAAGAAAT
GGAAAAACATTTC

Expression



Full and truncated open reading frames discovered in TCONS_00148698

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.