| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000330676 | TLC domain containing 2 | protein coding | ENST00000450909 | 603 | 278 | UTR3 | Trans | |
| ENST00000353047 | cathepsin B | protein coding | ENST00000450909 | 632 | 426 | UTR3 | Trans | |
| ENST00000409359 | Rho guanine nucleotide exchange factor (GEF) 4 | protein coding | ENST00000450909 | 526 | 282 | UTR3 | Trans | |
| ENST00000482603 | glyoxylate reductase/hydroxypyruvate reductase | processed transcript | ENST00000450909 | 501 | 288 | noncoding | Trans | |
| ENST00000593250 | centrosomal protein 76kDa | nonsense mediated decay | ENST00000450909 | 614 | 281 | UTR3 | Trans | |
| ENST00000621141 | G protein-coupled receptor 1 | protein coding | ENST00000450909 | 541 | 287 | UTR3 | Trans | |
| TCONS_00021902 | protein tyrosine phosphatase, non-receptor type 14 | novel protein coding | ENST00000450909 | 600 | 305 | UTR3 | Trans | |
| TCONS_00021903 | protein tyrosine phosphatase, non-receptor type 14 | novel protein coding | ENST00000450909 | 600 | 305 | UTR3 | Trans | |
| TCONS_00030588 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | ENST00000450909 | 651 | 436 | UTR3 | Trans | |
| TCONS_00043422 | vacuolar protein sorting 37 homolog C (S. cerevisiae) | novel protein coding | ENST00000450909 | 678 | 430 | UTR5 | Trans | |
| TCONS_00065103 | UBA domain containing 2 | novel protein coding | ENST00000450909 | 605 | 288 | UTR5 | Trans | |
| TCONS_00065859 | ubiquitin specific peptidase 12 | novel protein coding | ENST00000450909 | 650 | 287 | UTR3 | Trans | |
| TCONS_00065864 | long intergenic non-protein coding RNA 412 | novel protein coding | ENST00000450909 | 626 | 430 | UTR3 | Trans | |
| TCONS_00148387 | reticulon 4 | novel protein coding | ENST00000450909 | 651 | 289 | UTR3 | Trans | |
| TCONS_00148389 | reticulon 4 | novel protein coding | ENST00000450909 | 651 | 289 | UTR3 | Trans | |
| TCONS_00190999 | zinc finger protein 721 | novel protein coding | ENST00000450909 | 605 | 267 | UTR5 | Trans | |
| TCONS_00194686 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | ENST00000450909 | 632 | 288 | UTR3 | Trans | |
| TCONS_00195633 | aspartylglucosaminidase | novel protein coding | ENST00000450909 | 511 | 287 | UTR3 | Trans | |
| TCONS_00237101 | cathepsin B | novel protein coding | ENST00000450909 | 632 | 426 | UTR3 | Trans | |
| TCONS_00237103 | cathepsin B | novel protein coding | ENST00000450909 | 632 | 426 | UTR3 | Trans |
>TCONS_00237103 (1761 nt)
GGTGATGCCGAGCTGAAGCTGGGAAGCGGATGTGAGGGAAGAGTTCCAGGCAGAGGGAAGGCAAATGCAGAGATCCTCAGGCAGGAACACTGAACTGTTC
TCCGTATTTGAGGAGCAGAGGGCGTGTCAGTGGTGGCCGCAGCAGCTGAGCAAAGGTCTTAGAATCCCAGCTAATGTCGTGGGACCTAGCACCCAATCCC
AAAAGAAAGAAGAATAGATAGGAACCCACTGTTGACAAGAAGGTGCACTGAGAAGTGTTTTTATCTGACCCGATCTGCATCCAGTTTAGAAGCCGATACA
TCAGGGATTTAACAATCTGTCTTAATGTCTAGCAAGGGGGGTTGCTGGAGGGAAAACACAGAGTCAGAGTTCTATCTTCAGCCCTGCCAGCAGGTCCCTG
GGAGATGCTAGACGAGTGACTTTTCTCTGGGCGTGGTTGGTGTAAGGGATGCACACGCAGGAGGAAGGTCGGAGTGTAAATGTGTGACCTGGGCCTGTTA
CTGGGTATAAATGGGCCTGTAGTGACCGGGAGCTCATGTTCTACCAAAGGGGTTGCCAATTTTCTGATTTCGAGTGTGGCGGTGTAAAAGAGAAAAGCAA
CTGCTGCCAGCTGGGAGCTGGTTTGCACCCTCACTCCAGAAGCCTTGATGTTGCTAGGAGCTGACCTGGCACCAACAGCACGGCCATGGTGGTGTCCTGT
TGAGCAAAATAATTTCACAAAAAACATCAGACAAGGTCACTCTCTGACTGATCTAGAAAAAGACCATTCCATAATAAAGCCTCAATACAGAAACAAGAAC
ATTGTCCAAACCACAAAAATTACCAACACAATCCTCTCTCCCACAGCGTAAGTTACTGCTGCTTTTTTTTTGGTTGTTGTTTTTGTTTGTTTTGTTTTGT
TTTTGAAATGAAGTCTTGCTCTGTTACCCAGGCTGGAGTGCAGTGATGCAATCTTGGCTTACCACAACCTCCACCTCCAGGTTCAAGCGATTCTCCTGCC
TCAGCTTCCAGAGTATCTGGGATTACAGGCACCCACCATCATGCCCAGATCATTTCTGTATTTTTAGTAGAGACGGGGATTCACCAAGTTGCCCAGGTGC
TTCCTGGTGGTCCTTGGTTGGAGGGTACTATCAGAAATGGAGGAGCAACAAAGATTCAGCTGAAGCCCTCACTGCCTGGGACTGGGACCCTTGACTCGTC
ATTGTATGCACACCTGAAACTGCTTATGTCGCTGAGGTGCCAACCTGCTGATGGTTGGAAGCTAATTGAGTTCTGATATTGTGTTGATACCCTTAAGCAT
TGGGTTTACTTTTTATTTTAATTAATTAATTAATTAATTTTTGAGACAGAGTTTCACTCTTGTTGCCCAGGCTGAAGTGCAATGACACGATCTCGGCTCA
CCGCAACCTCCGCCTCCTGGGTTCAAGCAGTTCTTCTGCCTCAGCCTCTTGAGTAGCTGGGATTACAGGCATGCACCACCACACCTGGCTAATTTTATAT
TTGTAGTAGAGACAGTTTCTCCATGTTTGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTAGGATTACAG
GCGTGAGCCACCATGCCTGGCCATATTTTTTATTTTTCATTTTTTACTTTTTGAGATAGGGTCTCACTCTGTTGACCAGGCTGGAGTGCAGTGGTACGAC
TCAGCTCACTGCAACCTCTGCTTCCCAGCTCAAGTGATTCTCCAGTTTCAGCCTCCTGAGTA
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.