Detailed information on ENST00000456363

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000333896 spectrin, beta, non-erythrocytic 1 protein coding ENST00000456363 1033 369 UTR3 Trans
TCONS_00138597 spectrin, beta, non-erythrocytic 1 novel protein coding ENST00000456363 1033 369 UTR3 Trans

Sequence

>TCONS_00138597 (601 nt)
TCTTTTCACTTTTAAAGGAGAGTTGCAGGAGGGGAAATAGACAAAAAACAAAACCCTGAGTCAAAATAATGTGAGTGGACTTTAAAGGTGACAAATCTTC
TCTAGTGTGAGATTCGGAAACTTCTGGTGAGGAGGAAGTATGAGTTTGGTCTGGAAGGCCTGAGCCAGGTGTGAGTCCAGAGAGACATGGGGTTAGTATG
TAGAGAAACCAGGATAAAAAAAAATTTAGTGCTGCAGGTTTCTGATTCCACTGACACATCTAAATATGGCAAAAGAGCAAGTGAATGTCTCACAAGGTTT
TGATGTATAATATGGATTTGGTTTTGTTTTTATCGGTACAAGGAAACCATCTCTGTCACCAGCTTTTATTTCTAAGGAAAAGGATTTTTGTGAAAACATT
TTCAATTCCTGCTGGTGGCCTGATAGATACCATCCTAAAAGCTTCCTTTATCAGAGAATTCCACAAAAAGTCTTGAGAAAATGAACAATGAATCAGAAGA
TTAATCCAAGATGTACAGTGGAGTTTGTCTACAGAGACACTGACATGACTTCTGAAGCCAGGGGGCATGCGAGCGCTCCCAGGCACGGTCCACCAAGTGC
AA

Expression



Full and truncated open reading frames discovered in TCONS_00138597

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.