Detailed information on ENST00000456587

lncRNA-RNA interactions

Number of interactions: 3

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000370563 chloride channel accessory 4 protein coding ENST00000456587 668 230 CDS Cis
ENST00000496322 chloride channel accessory 4 processed transcript ENST00000456587 668 230 noncoding Cis
TCONS_00004984 chloride channel accessory 4 novel protein coding ENST00000456587 668 230 CDS Cis

Sequence

>TCONS_00004984 (521 nt)
AGCCCTAGCTGCTGTTCCCCATTCGATGCCCCTTTTCAGCCGACCTTGCCAGGGGCAGTCCATGAAAGTTGAATATGATCTCCTTGAAACTTAGCCTCGA
GGTCTACAATTTTACCAGGTGAGAACACCTGAGAATGATTACCATTAGGAGGCACTCCTGATACAGTAAACGACCCTCCAGAGAAATTGATTAAGAAAAC
TTAGAGAACATAAAATAATAGACCTACCTCTGCAATACCTGGTATTCGAAGACGGGCAGACCGAATATTTAGTTCACCTTCTTGAAAATCTGAGCCAACT
GGACTCCAAGTGCCACGAGAACAGAGATTGGGTCTGGTCCCCAGCTTCAGTGCCTCCAAGGCAGAAACTCAAGAGACGTTGTTGAACTGTCAGCCTTTAC
ATTTATGCATTACTATTGAAGGCCTGGAATAAATGGATCGTGTTTTACCTGTTATCTTGCTCATCTCTATTACTGCTTCATCAGCAGCTCTTCCCAAAGC
AATAAAATGAACAATGGCCCCA

Expression



Full and truncated open reading frames discovered in TCONS_00004984

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.