Detailed information on ENST00000457898

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000513143 podoplanin protein coding ENST00000457898 519 276 UTR5 Trans
TCONS_00037377 NAD synthetase 1 novel protein coding ENST00000457898 612 296 UTR3 Trans

Sequence

>TCONS_00037377 (3244 nt)
TGTGGTGGTGGTGCATGCTTGGAATCCTAACTACTTGCGAGGCTGAGGTGGGAGAATTGCTTGAGCCCAGGAGTTTGAGGCTGCAGTGAGCTATGATCAC
GGCCTCGCACTCCAGTCTAGGCAGCAGTGAGACCCTAGAGAATTCTCTAAAAGAATTAAAAATGAAAAAAAGCCACAACACTTCTTTTGCCTGAGGATTC
TGTAAGAAGCAGTTTTTATTGTTATGGAAATAGCCACTCTGATTAAGAAACTGTAGAGAGGAGAAAGAAAATGAAAATTGAAGATTCTCTTGCCCATTGA
ATTAAGGGTAAGGAGATTGCATTAAAGGATCTTCGGGAGCAGTAACTTTTTTATGTCGATTTCACATAGCATTACTTCACATCGAGTCAGTTTTAAGTAC
TTGGAGGGTGGAAATCAGAAAGCTTAGATGTAGAGGAAGCTTTATTAGAAGTGTGTACCATGGCTGGGTGTGGTGGCTCATGCCCACAATCCCAGCACTT
TGGGAGGCCGAAGTGGGTGGCTTACTTGAGGTTAGGAGTTCGAGACCAGCCTGGCGAACATGGTGAAACCCCGTCTACTAAAAATACAACAATTAGCCAG
GCATGGTGGCGCACGCCTGTAATCCCAGCTACTTGAGAAGCTGAGGCATGAGAATTGCCTCCAGGAAGTGGAGGTTGCAGTGAGCTGAGATCATGCCACT
GTACTCTAGCCTGGGCAACAGAGCAAGACTGTCTCAAAAGGAAAAAAAAAAAAAGTATGTACCATTGAAGATCAGCACTTGGATTGTGGAGACAGACCTG
GCCTTAGGATCTAGGCTATCCCCTGGTTAGACGTGTGGCCACAGGCTGTTCCTTCACCTGAGCGTCACTCGGATGAGGCACTAGCAGATGCACATTGCAT
TGTTTGACCTTAATGACCTTTCTCTGGAGTCAGGTAAGTACCCAGAACAGTTCATCATGGTAGGGAGGAGGAGGTGGCACAGCTGATGACACAGCCCTCA
GGAATCTAGCCTGAAAAGCACCTTGTGGGGTCTGGGGCCAGGAGCAAGGGACAGCTTGATGCTGTCCATCACTAACTGGAATCCCAGCTGGAAAAAACTC
ATTACAGGACCAGAATCTCCAGGAAAACTCAATCCCAAACCAGGCATCACTTCAATTACACCCCTGACTGGAGTTTACAAACTGGTGGGTGGATGGTAGA
AGATGGCTGCTTTCTTGGGGGGTATGCTAGACCTCACTTGCCCTCTGCACAACAGAATTTGGATGCACTGGGAGGTGTGGCAGATAGACTCCCAGGTGGT
CACTGTGATCCCCACCTGCTGTTCACAGCCTTATGTACTCCCTGCCCCTTGAGATGGCCTAGACCTGTGACTGCTAACCAGTAGAGTGCCACAAAGGTGA
CAAGATGTTATTTTCATGGTTGCCTTATGTAAGACTGCAACATCTGCCTTGCTGAGAAATTCTCTTGCTGGCTTTGAAGAAGGAAGCTGTCATGTTGTGT
GAGCTGCCCTTGGGAGAGGGTCAGGTGGCTAGGAACTGAGGTAGCCTCTGACAGCCAACAAGAAACTGAAGCTCAGTCCAGCAGTCTGCAAGAAAGCAAA
TGCTGCCAGCAACCACACAAGCTTGGAGGCTGATCACTCCCAGGTAAGCCTTCAGGTGAGACCCCAGGCCTGACCAACACTGACTGCAGCCTTGCAGAGG
ACCAGCTAAGCTGTGCCCAGACTGTCCCATAGGAACAGATGGTAAATGTATTGTGTTAAGTCGCTAAGTTTCTGGTAAGGTTATGCAGCAATAGATAACC
AACACAAAGGTTAGCAAAGTGTGTTTGAGGTGGGAATCAGTGTGGAAAAGAGAGAATCTGGATAGACTTAATAGCTGTAGGGCCTTGGGAGGTCCCTTAT
GATGCTCCTTTGGGCCTTCCTGTTGCCTTTAAGTAATGCTTATTGTTTATTGCTAAAGTAATGCTTAACTCTCTGCTAGGCACTATTCTATGCACTTATA
AAACTCATTGCATCATCTCTACAACCCCATGAGGTAAGGACTTGTTTTTTTTGTGTTTTGAGACAGTCTCGCTCTGTGGCCCAGGCTGGAATGCAGTGGC
ATGATCTCAGCTCACTGCAACCTCTGCCTCCTGCGTTCAAGCAGTTCTTCTGCCTCAGCCTCCGAGTAGTTGTGATTACAGACGTGTGCCAGTACTTCCG
GCTAATTTTTTTGATTTTTAGTAGAGACGGGGTTTCATCATGTTGGCCAGGCTGGTCTCAAATTCCTGACCTCAAGTGATCAGCCTGCCTTGGCCTCCTA
AAATGCTGGGATTACAAGTGTGAGCCACCGCACCTGGCCACACAACAAACTTTCTACACATTGATGTATGATATTCCACTGAGGGGAGAGGCACCCTCCT
GGCTTAACTGAAGGGGTGTACCACAGAAGGACATGGTGGACATCACACACAGATTCTGTGGCATAGGATGAACTGCTAAACTAGGATATTTTAAAGTCCT
CCAACATCTGTAATTGTTTTCCGTGGTGAACAAGTGTCGTGTGTCTCAAGAAGACAGGCCACAGTGACCTCTTTGAAAGCTTTCTGTCAAGTCTCTTATC
CAAGGGGAGCAAAATCACAAAGGTCCCAGGCGATTTTTTTTCCTCTTTCCTCTTTTCTTCATAAATCTTGGTTTTGCTTTTATTTGACGAAAACAATCTG
ATGCCTGTTCTCCCTTCTATACAATGGTAAATTAGCATGCAAGTAGCTATCCCTTTATTATTGTTTGATAGATTTTTGCAGCGGCTATGTCCGTAAAAAT
TAGCCCACCTGAGATATATCACTGGAGCCAACAGAACCCTGCACCCAACAGGCACCTTGTGCAGACCTGGACCCTTACAGCTGTTGGCTCATGTTCCTTT
GGTTCTTCTAATGAATATCATGAGTAGAAACTGAGCTCTTTGGCTTTTACCCACTACCATGACTCTAGTACATTTTCTCTCTCTCGTTTCTCTCATTTTT
GTATCATGATTTTCTGCCATCAGGGGCATCAGTGTGGGTTCCTGGTTTTGATGGTATGGAGTGAACTTCTGGGATCGTTTTATGACTGTATAACAGTTGG
TATTCTTCTGTTGATGAAGATTTGTGTTGTACCCAGTTTTTCCTTAGTATAAAAAGGAGGTTAATAAGAACATTTTTGCTAGAAGCCTTGTTGGATGTAT
TGTTCATTTTACGGGGGTAATCAATAAATGTAAGCGTGCTTCTTT

Expression



Full and truncated open reading frames discovered in TCONS_00037377

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.