Detailed information on ENST00000460059

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000283928 JAZF zinc finger 1 protein coding ENST00000460059 1310 447 CDS_UTR Cis
ENST00000427814 JAZF zinc finger 1 protein coding ENST00000460059 1310 447 CDS_UTR Cis

Sequence

>ENST00000460059 (527 nt)
AGAACATGTTGAAAGTCACTGGAAGGTGTGCCCGATGTGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGTTTGAAAGGGTTGCTGAATGCTTC<br />CCCTGAAAAAAGGTGGCTGTTTTCAAAATCAGCAACTGCTGGTGAGGATTTCTTGGCACAGTTATGACCAGCATGTTATTGCTGCATCTTCCTGATAATC<br />TCAGCCGACACCGGGGGATGGAAATTGATTGTGTGGTGCCGCAGGCCCTGAGCTGTCTTGTAACTCTTCCCACAGCGACACTTGAATGGTTTGCGGACAC<br />GAATCTGTGTTCTGTGACCATTCTTAGCGTGATACTTTATGCCATTCACATTCTGTGGAGAAGACAAAAATATTTATTACATGGATTCACAGGATACCTG<br />TCAAACTTCGGAAACCTCAATTTGGGTCTGGATTGCAGTTCCTGGATGGCAGCTGTTTAGAGTGTAGTCTTTTGCAAGGACTCCAGTTGGGACCCTTCAA<br />GGACATTCTGGTGTGTCGGTCATGGGC

Expression



Full and truncated open reading frames discovered in ENST00000460059

In silico ORF/peptide predictions
>peptide 1 (98 aa)
MTSMLLLHLPDNLSRHRGMEIDCVVPQALSCLVTLPTATLEWFADTNLCSVTILSVILYAIHILWRRQKYLLHGFTGYLSNFGNLNLGLDCSSWMAAV

>peptide 2 (54 aa)
NMLKVTGRCARCAASSSLLTMTSRCLKGLLNASPEKRWLFSKSATAGEDFLAQL


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT119747 (Evalue: 0)

Best hit to Swiss-Prot:
sp|Q5RDF5|JAZF1_PONAB (Evalue: 1.0E-34)