Detailed information on ENST00000460794

lncRNA-RNA interactions

Number of interactions: 5

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000367590 xenotropic and polytropic retrovirus receptor 1 protein coding ENST00000460794 509 250 UTR3 Trans
ENST00000482603 glyoxylate reductase/hydroxypyruvate reductase processed transcript ENST00000460794 616 268 noncoding Trans
ENST00000620139 melanoregulin protein coding ENST00000460794 548 274 UTR3 Trans
TCONS_00009095 xenotropic and polytropic retrovirus receptor 1 novel protein coding ENST00000460794 509 250 UTR3 Trans
TCONS_00251977 G protein-coupled receptor 82 novel protein coding ENST00000460794 513 274 UTR3 Trans

Sequence

>TCONS_00251977 (567 nt)
GAAGTCTTGTTCTGTCACCCAGGCTGGAATGCAGTGGCGCGATCTCGGCTCACTGCATCTCTGCCTCCCGGGTTCAAACAATTCTTCTGCCTCAGCCTCC
CGAGTAGCTGGAACTACAGGCATGCACCACCATGCCTAGCTAATTTTTATATTTTTAGTAGAGACGGGGTTTCACCATATTGTCCAGGCTGGTCTCGAAC
TCCTGACCACGTGATCCACCCACCTTGGCCTCCCAAAGTTCTGGGATTATAGACATGAGCCACCGCGCCCTGCCAGGGAATTGATTTTTATCTGCCATTG
CCCTCTCTCAGTAGGACAGTTCCTTTCTCTTCACCTCTTCTGTCAGCTAAAGACCATGAGAGGGAGAAAGCTAGAAGCTGAAGATTCTGAAAATCACTAA
CTGGCCTCTTCTTTCTCCTAGGTGTGGCACATTGGTTGACCTTTGCCAGGGCCCCCACCTTCGGCATACTGGACAGATTGGAGGACTGAAGCTGCTATCG
GCTGAGTATGCCCATCGTGGTTTCTCCGAGGTGAAAACTCCCACACTGTTTTCTACGAAGCTCTGGGA

Expression



Full and truncated open reading frames discovered in TCONS_00251977

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.