Detailed information on ENST00000461970

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000593250 centrosomal protein 76kDa nonsense mediated decay ENST00000461970 504 234 UTR3 Trans

Sequence

>ENST00000593250 (580 nt)
GTATTGAAATGATAGATTTTTAAACTAACTTGCTTTTTATCTTTTCTTTCCTTTTCTAAAGTGATGTTCCTCCATCTTACGTTCAAACTAAATTTTCTAG
GCTGAAAGCTGTCTATGTTCCATTTTGGCAGAAAAAGACTTTTCCAGAGATCATCGACTACCTTTATGAGACGACTCTACCTTTGCTGAAGGAAAAGTTA
GAAAAAATGATGGAGAAAAAAGGCACTAAAATCCAGACTCCTGCAGCACCCAAGCAAGTTTTCCCATTTCGAGACATCTTTTATTATGAAGACGATAGTG
AAGGAGAGGACATAGAAAAAGAAAGCGAAGGCCAGGCGCCATGCATGGCTCACGCCTGTAATTCCAGTACTTTGGGAGGCCAAGGCCGGTGGATCATCTG
AGGTCAGGAGTTCGAGACCGGCCTGACCAACATGGTGAAGACCTGTCACTATTAAAAATGCAAAAATTAGCCGGGTGTGGTAGTGCACACCTGTAATTTC
AACTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAGTGAGCCAAGATCGCACCACCGCA

Expression



Full and truncated open reading frames discovered in ENST00000593250

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.