Detailed information on ENST00000462378

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000560870 sense_intronic sense intronic ENST00000462378 505 253 noncoding Trans

Sequence

>ENST00000462378 (593 nt)
TTTTTTTTTTTTTTTGAGATGGAGTGTCTCTCTGTCGCTCAGGCTGGAGTGTGGAGTACAGTGGCACGATCTCAGCTCACTGCAGCCTCCATCTCCTGGG<br />TTCAAGCAATTCCCCTGCCTCAGCCTCTCTAGTAGCTGGGATTGCAGGTGCCCACCACCAGAACCAGCTAATTTTTGTAGTTTTAGTAGAGATGAGGTTT<br />TGCCATGTTGGCCAGGCTGCCCTTGAACTCCTGACTTCAGGTGATCCACCCAGCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACGCCC<br />AGCCGGCCTATTCTGATATGGTGTTTGCCAAATAGCAGCTGGCATCAAAAGCAACTGGTGTGTATGAAGTGGGAGTGTGTTCTGTTTCTAGATTCCTGAT<br />TCTCCTTCACCTCGTTGAATCAAGTCATGTCTGTTCTTGCTTTTAAGATTTCTTACCGGACCCTTGAACCTCAATGATCCAGATGCAAAATGCAGATTCC<br />CCAAAATTTTTGTAAATACAGATGACACTTATGAAGAGCTCCATTTAATCGTTTATAAGGCCATGAGTGCGGCTGTGTGCTTTATGATCGACG

Expression



Full and truncated open reading frames discovered in ENST00000462378

In silico ORF/peptide predictions
>peptide 1 (74 aa)
FFFFLRWSVSLSLRLECGVQWHDLSSLQPPSPGFKQFPCLSLSSSWDCRCPPPEPANFCSFSRDEVLPCWPGCP


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT119075 (Evalue: 0)

Best hit to Swiss-Prot:
sp|Q8N2A0|CX062_HUMAN (Evalue: 2.0E-28)