| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000336505 | suppressor of cancer cell invasion | protein coding | ENST00000463171 | 621 | 286 | UTR3 | Trans | |
| ENST00000511184 | E74-like factor 2 (ets domain transcription factor) | nonsense mediated decay | ENST00000463171 | 514 | 290 | CDS_UTR | Trans | |
| ENST00000524264 | SAP30L antisense RNA 1 (head to head) | antisense | ENST00000463171 | 596 | 286 | noncoding | Trans | |
| ENST00000620139 | melanoregulin | protein coding | ENST00000463171 | 503 | 281 | UTR3 | Trans | |
| TCONS_00030130 | calcium/calmodulin-dependent protein kinase II gamma | novel protein coding | ENST00000463171 | 630 | 286 | UTR3 | Trans | |
| TCONS_00107864 | transient receptor potential cation channel, subfamily V, member 1 | novel protein coding | ENST00000463171 | 572 | 289 | UTR3 | Trans | |
| TCONS_00109011 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000463171 | 545 | 288 | UTR5 | Trans | |
| TCONS_00109011 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000463171 | 523 | 283 | UTR5 | Trans | |
| TCONS_00132247 | zinc finger protein 43 | novel noncoding | ENST00000463171 | 609 | 282 | noncoding | Trans | |
| TCONS_00135884 | zinc finger protein 347 | novel protein coding | ENST00000463171 | 599 | 266 | UTR5 | Trans | |
| TCONS_00163084 | T-cell lymphoma invasion and metastasis 1 | novel protein coding | ENST00000463171 | 604 | 286 | UTR5 | Trans | |
| TCONS_00224726 | caldesmon 1 | novel protein coding | ENST00000463171 | 558 | 290 | UTR3 | Trans | |
| TCONS_00224728 | caldesmon 1 | novel protein coding | ENST00000463171 | 558 | 290 | UTR3 | Trans | |
| TCONS_00249683 | suppressor of cancer cell invasion | novel protein coding | ENST00000463171 | 621 | 286 | UTR3 | Trans |
>TCONS_00249683 (753 nt)
TGGAAGGAGCCTCCTGCTTACACATTTCGAGACTATAGTGCTCTCCTATATATGAATGATGACTTTGAAGGAGGAGAATTCATATTCACAGAGATGGATG
CTAAGACTGTGACTGCCTCTATAAAACCAAAATGTGGGCGCATGATCAGCTTCTCATCTGGAGGAGAGAACCCTCATGGGGTGAAGGCAGTCACCAAGGG
AAAGAGGTGTGCTGTGGCTCTGTGGTTCACCTTGGACCCACTTTATAGAGAATTGGTGAGTTTCTCACCCGCCCAGAAAGCCAATTAGGCTTGCTTCATG
AACTGCTTTATCTGAGAAGTCCTTTAAATTGCTTCGTCTGAGGAAAAGAAGAGGGTAAAGGCAGTTCTTAATCAGATATGTTCTAGTAAGTGAAGATGTT
TGTAGAAATAGCTGTGTCAATGATATTTGATAGTCACTAATCTGTCTTGAGCTTATTAACAAATTGTAAGGCTGGGCGTGGTGGCTCACTCCTATAACCC
CAGAACTTTGGGAGGCCGAGGTGGGCAGATCACTTGAGGTCGGGAGTTCGAGACCAGCCTGATCAACATGCTGAAACCCCATCTCTACTAAAAATACAAA
ATTAGCTGGATGTGGTGGCATGCGCCTGTAGTTCCAGTTACTCGGGAAGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGTAAATTGCAGTAAGCCG
AGATCGCACCACTGCACTTCAGCCTGGGCAACAGGGCAAGACTCTGTCTCAAAA
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.