Detailed information on ENST00000463260

lncRNA-RNA interactions

Number of interactions: 6

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00101169 myosin phosphatase Rho interacting prote... novel protein coding ENST00000463260 522 304 UTR3 Trans
TCONS_00141667 Rho guanine nucleotide exchange factor (... novel protein coding ENST00000463260 549 297 UTR3 Trans
TCONS_00141670 Rho guanine nucleotide exchange factor (... novel protein coding ENST00000463260 549 297 UTR3 Trans
TCONS_00141673 Rho guanine nucleotide exchange factor (... novel protein coding ENST00000463260 549 297 UTR3 Trans
TCONS_00141679 Rho guanine nucleotide exchange factor (... novel protein coding ENST00000463260 549 297 UTR3 Trans
TCONS_00141681 Rho guanine nucleotide exchange factor (... novel protein coding ENST00000463260 549 297 UTR3 Trans

Sequence

>ENST00000463260 (1941 nt)
CTGCAAGCTCCGCCTACCAGATTCTGGTGATTCTTGTGCCTCAGCCTCCCAAGTAGCTGGGATTGCAGGCGCCCACCACCACGCTCAGGTAATTTGTGTG<br />TGAGTGTGTGTCTATGTATATATATATATAGAGAGAGAGAGAGAGAGACACACACTCACATGTTTTGGGGTTTTTTTGTTTTGTTTTGTTTTTCTTGAGA<br />CAGAGTCTCGCTGTGTTGCCAGGTGAGTACTGTGGCGTGATCTCGGCTCACTGTAACCTCCGCCTCCTGGGTCCAAGCGATTCTTCTGCTTCAGCCTCTG<br />GAGTAGCTGGGACTACAGGCGCGTGCCACCAAGCCCAGCTAATTTTTGTAGTTTTAGTAGAGATGGGGTTTCACCATGTTGGGCAGGATGGTCTCAATGT<br />ATTGACTTTGTGATCCGCCCTCCTCGGCCTCCCGAAGTGCTGGGCTCACAGGCGTGAGCCCCCGCGTCCAGCCCCATCTGCATTTCTGTGATGTCTGTGT<br />AAGTTCTGGGTCCCAGCTGGGAGCCGGAAGTTACAGTCTGCTTGCGTCGCTGTTTGACCTGTAGAGGGGCCTTATCTCGCTCTACGAACTTGTTTCTTAT<br />TGGGAGAGTGTTTTGTGGTTGGCTTTTAACCTCTTGTTCTGATTCTAGTGGAATCCCCCAAAGAAGGTAAAGGGAGCAAGCCTTCCCCACTGTCTGTGAA<br />GAACACCAAGAGGAGGCTGGAGGGCGCCAAGAAAGCCAAGGCGGACAGCCCCGTGAACGGCTTGCCAAAGGGGCGAGAGAGTCGGAGTCGGAGCCGGAGC<br />CGTGAGCAGAGCTACTCGAGGTCCCCATCCCGATCAGCGTCTCCTAAGAGGAGGAAAAGTGACAGCGGCTCCACATCTGGTGGGTCCAAGTCGCAGAGCC<br />GCTCCCGGAGCAGGAGTGACTCCCCACCGAGACAGGCCCCCCGCAGCGCTCCCTACAAAGGCTCTGAGATTCGGGGCTCCCGGAAGTCCAAGGACTGCAA<br />GTACCCCCAGAAGCCACACAAGTCTCGGAGCCGGAGTTCTTCCCGTTCTCGAAGCAGGTCACGGGAGCGGGCGGATAATCCGGGAAAATACAAGAAGAAA<br />AGTCATTACTACAGAGATCAGCGACGAGAGCGCTCGAGGTCGTATGAACGCACAGGCCGTCGCTATGAGCGGGACCACCCTGGGCACAGCAGGCATCGGA<br />GGTGAGGCGGGGTTGCAGTGACTGGTGGCCGCAAGCCCTTCCCTGGGGAGTACCTGATGGCTGCCCTTTGACCCCCGGTGGCTGCCCTTTGACCCCCGGG<br />TGTGCTCTCAGCGCAAGTGGTCCTAGAACAGGATTCTTTTTGGAAATGTCTGTCGACTGGACCTTGGTGGATTTGGAAATGGAACTGAGGGACCGGTGAC<br />ACGTGCTTCAGACCGGTCTGGGGTGCGGCGCACACCTGGGCCCGTGCAGGGCTCAGCTCGGCAGCAGCTCTGAGGGCAGCTCAATGAAAAAGTGAATGCA<br />CACGCCCTTGTTGGCGTGGCCTGGCATGGCCTGGTGCTATCGGCAGCCGCTCTCCACTCCCCGACTGATACTCAATTACGTGAAGCCAAGAAAGATGATT<br />TTTAGAACCTTTGCCTATATTAGGTTGTACTTATGTACATATTTTGCAGTGTTTCACAGGAGAAAGTGGCCTTAACTGCCCCTTATTCTCTCTCCACGTT<br />GTAAATAAACATGTGTTTAATACAAGTTAAAGCTATGTATGAAAACTCAGAACTTGAATCCCGTCAGCTTAAAACTTGTGTAGGGAATCCTGACTTTTAA<br />AATGTGAGGGTATTTGGATCTGTGTTGAAAGTCGTATATTTTTATCTGTGCGGTGCTGAGTGCAGGCCACCAGCTCCTAAATAGAGGTTCCCTATATGCG<br />CGTATGACATGGTGAATAAACACAACTCTCTCCACTCAGGA

Expression



Full and truncated open reading frames discovered in ENST00000463260

In silico ORF/peptide predictions
>peptide 1 (59 aa)
MHTPLLAWPGMAWCYRQPLSTPRLILNYVKPRKMIFRTFAYIRLYLCTYFAVFHRRKWP


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT000301 (Evalue: 0)

Best hit to Swiss-Prot:
sp|Q96S94|CCNL2_HUMAN (Evalue: 3.0E-51)