Detailed information on ENST00000463260

lncRNA-RNA interactions

Number of interactions: 6

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00101169 myosin phosphatase Rho interacting protein novel protein coding ENST00000463260 522 304 UTR3 Trans
TCONS_00141667 Rho guanine nucleotide exchange factor (GEF) 4 novel protein coding ENST00000463260 549 297 UTR3 Trans
TCONS_00141670 Rho guanine nucleotide exchange factor (GEF) 4 novel protein coding ENST00000463260 549 297 UTR3 Trans
TCONS_00141673 Rho guanine nucleotide exchange factor (GEF) 4 novel protein coding ENST00000463260 549 297 UTR3 Trans
TCONS_00141679 Rho guanine nucleotide exchange factor (GEF) 4 novel protein coding ENST00000463260 549 297 UTR3 Trans
TCONS_00141681 Rho guanine nucleotide exchange factor (GEF) 4 novel protein coding ENST00000463260 549 297 UTR3 Trans

Sequence

>TCONS_00141681 (1940 nt)
CTGCAAGCTCCGCCTACCAGATTCTGGTGATTCTTGTGCCTCAGCCTCCCAAGTAGCTGGGATTGCAGGCGCCCACCACCACGCTCAGGTAATTTGTGTG
TGAGTGTGTGTCTATGTATATATATATATAGAGAGAGAGAGAGAGAGACACACACTCACATGTTTTGGGGTTTTTTTGTTTTGTTTTGTTTTTCTTGAGA
CAGAGTCTCGCTGTGTTGCCAGGTGAGTACTGTGGCGTGATCTCGGCTCACTGTAACCTCCGCCTCCTGGGTCCAAGCGATTCTTCTGCTTCAGCCTCTG
GAGTAGCTGGGACTACAGGCGCGTGCCACCAAGCCCAGCTAATTTTTGTAGTTTTAGTAGAGATGGGGTTTCACCATGTTGGGCAGGATGGTCTCAATGT
ATTGACTTTGTGATCCGCCCTCCTCGGCCTCCCGAAGTGCTGGGCTCACAGGCGTGAGCCCCCGCGTCCAGCCCCATCTGCATTTCTGTGATGTCTGTGT
AAGTTCTGGGTCCCAGCTGGGAGCCGGAAGTTACAGTCTGCTTGCGTCGCTGTTTGACCTGTAGAGGGGCCTTATCTCGCTCTACGAACTTGTTTCTTAT
TGGGAGAGTGTTTTGTGGTTGGCTTTTAACCTCTTGTTCTGATTCTAGTGGAATCCCCCAAAGAAGGTAAAGGGAGCAAGCCTTCCCCACTGTCTGTGAA
GAACACCAAGAGGAGGCTGGAGGGCGCCAAGAAAGCCAAGGCGGACAGCCCCGTGAACGGCTTGCCAAAGGGGCGAGAGAGTCGGAGTCGGAGCCGGAGC
CGTGAGCAGAGCTACTCGAGGTCCCCATCCCGATCAGCGTCTCCTAAGAGGAGGAAAAGTGACAGCGGCTCCACATCTGGTGGGTCCAAGTCGCAGAGCC
GCTCCCGGAGCAGGAGTGACTCCCCACCGAGACAGGCCCCCCGCAGCGCTCCCTACAAAGGCTCTGAGATTCGGGGCTCCCGGAAGTCCAAGGACTGCAA
GTACCCCCAGAAGCCACACAAGTCTCGGAGCCGGAGTTCTTCCCGTTCTCGAAGCAGGTCACGGGAGCGGGCGGATAATCCGGGAAAATACAAGAAGAAA
AGTCATTACTACAGAGATCAGCGACGAGAGCGCTCGAGGTCGTATGAACGCACAGGCCGTCGCTATGAGCGGGACCACCCTGGGCACAGCAGGCATCGGA
GGTGAGGCGGGGTTGCAGTGACTGGTGGCCGCAAGCCCTTCCCTGGGGAGTACCTGATGGCTGCCCTTTGACCCCCGGTGGCTGCCCTTTGACCCCCGGG
TGTGCTCTCAGCGCAAGTGGTCCTAGAACAGGATTCTTTTTGGAAATGTCTGTCGACTGGACCTTGGTGGATTTGGAAATGGAACTGAGGGACCGGTGAC
ACGTGCTTCAGACCGGTCTGGGGTGCGGCGCACACCTGGGCCCGTGCAGGGCTCAGCTCGGCAGCAGCTCTGAGGGCAGCTCAATGAAAAAGTGAATGCA
CACGCCCTTGTTGGCGTGGCCTGGCATGGCCTGGTGCTATCGGCAGCCGCTCTCCACTCCCCGACTGATACTCAATTACGTGAAGCCAAGAAAGATGATT
TTTAGAACCTTTGCCTATATTAGGTTGTACTTATGTACATATTTTGCAGTGTTTCACAGGAGAAAGTGGCCTTAACTGCCCCTTATTCTCTCTCCACGTT
GTAAATAAACATGTGTTTAATACAAGTTAAAGCTATGTATGAAAACTCAGAACTTGAATCCCGTCAGCTTAAAACTTGTGTAGGGAATCCTGACTTTTAA
AATGTGAGGGTATTTGGATCTGTGTTGAAAGTCGTATATTTTTATCTGTGCGGTGCTGAGTGCAGGCCACCAGCTCCTAAATAGAGGTTCCCTATATGCG
CGTATGACATGGTGAATAAACACAACTCTCTCCACTCAGGA

Expression



Full and truncated open reading frames discovered in TCONS_00141681

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.