Detailed information on ENST00000463753

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00193640 hematopoietic prostaglandin D synthase novel protein coding ENST00000463753 649 322 UTR3 Trans
TCONS_00193640 hematopoietic prostaglandin D synthase novel protein coding ENST00000463753 1116 453 UTR3 Trans

Sequence

>TCONS_00193640 (2963 nt)
AGAGAAGAGTGTCCAGCTCCTCCAGAGGCTGCCCGCCCGCCGCTCCTTCCCTGCCCACCTACTATGAGGAGCAGCTCCTCCCACCTGCCCATAAAAGCCA
AGTGCATGTTACCAGCAGCGGATCACAGCCCTTCCCCGATCCTCTCCGTGGGAGCCAGCGAGCCTCTCTCCCTGATCTTACGTGCTCAAGGGAGCTCACA
CGTTCACCAACTCACCCTTGAAGTCATCTCAAGAACAAAAGACAACTGAAAGACGTTTCCATACAGTTCCTCGCTCAGAACAGCTTCAGCTGTCTATGGG
AAGGCTTCACAAGACAAAGAGCTAGGACTTGGCCATTTACACAAAACCAAAAGTGAATTACCCAGAGTGTGCTGGCAGAGAGACTTGAATGTAAGGACAT
GGGAAAATCTACACAGGTTGCCAATGGTTTGTGACTGTGAGAAAAGAAAAGAAAAATTAAAGAAAATCTTACTAGCATAATTCACATTGGACAACATGAG
CACATTCCAGTCAATCCACTTTATAGACATGATCTCACTGGTCTCCCCAACATCCCTACAAGGAAATGAGGGGGACCAGTATGGCTCCACCCTTAGGTCA
AAAGCCCATCCTTCACTCCCACTTGTGGCTGTGAGTGGGTGGAACACATTTAAACAGGGGAACAAATTACCATCTTCCTTGCTTTTGACCCTTTAACATG
CGGGTGAGCAAGTCTGCCTTTTCCCTGCTTGAGGCCATACAATTCCCAAAACAACTTGTCTGAAATGTTGGGGGCTGAGTCATTGGCCAGTGATAGTTTT
CAAACAACTGCTGGTTTGTTTCTCAACCACTGCTTGGCCATGCTGACTTGGACACAATACAGCATGTAATAAAAGTGCCTGGGATATTTTCCTCCTTGGC
CCAGAGAAGACTTTTAGAAGGAAAGACAATGGTGAATACGGAAGGGGAGATGAATGCACTAGAAAGATATGTTGCCAGCATTGTGCTCAGCCGAAGAGAA
GCTTTGAGACCAAGAAATGTGAGCATATTGGGCATCTAGAAGTTCTCCCAGATAGTAGCGTAGATCTCCATTTTTCTGGGTTGTTTGTTGTTGTTGTTTG
TTGTTGTCATTTTCTGCACTATGCTGCCTCTCAAGACTCCCTTATGTGTGCTATAAAAAAAAATCCATGACAGAATGGTCTATTCTCCACAAAAATAGTT
ACTATTGTTGTTGAGGTGTTACTAATAGTTACTAGTAGTTACAAAAATAGTTACTAATGTTGTTGAGGTGAAGTCAATGGGAAAGATAGTAGTAAAATAG
CAAAAATGTATTAGATAGTATTTTTCACATTGGGAATATAAGACAATTCATTCAAAAACCAACTCCTTAGGATTCATTTTATTATCTTACACTTAAAAAT
ATGTTTAGATTTTTCTTTCTTGCACTAGAAATTAAATTGTCCTATATATTGAGGGATGAAAAGCACAGATGATTATCCGTATAAATATTGACACACATAC
TCACTCTATCCACATAGCTATCTGTTATGGATAAAGAACTCGGCAACTTCTAGCAGTCATCTGAGATGAGCACCATATGTGCATTATTTCACTAAAGCTT
TCAGAGCTTGAGAAAAATAGCCTGAAGAATAAGATTGTTTCTTTCTGAGCCAAGGTTGCAATCTTCCAAGTCCAAGATGTGCTTGAAAATACTCATTAGG
TAATTGTCAAAGCCTAGGAAGACCAGTTTAAGAATATGAAATAATATTACTACTGACTTCTCTTTTTGTGTTCAATCCAGATGGAAGCTGGACACATGAG
AAGTGACGTTTGTATAATAGCAAAGAAAAGAACAGAGAACAAGAAAGCAAAACCCTTCACACCTATGTTCTCTTTATAGGATCTCATTACTGTTTGCTCT
CTATAATCCCCAGAAAATAGAAAAAGTATATCTATCCAATAAGTTGTGGAAAGTCTCCCTCTGTCCTTCTATAATAGAGTTTCCAGTCATTGTTAGACAA
CTGCATTTCATTCACCAATAGTGGCCTATTGAAATCATCAACAGGAGAAACAGTTGTTAATATCAAATAAAGAGTCTTGCAATGGAAGTCAAAATACTTT
ACTCTTTCACTAACTTGGTGTATGATCTTGAGCAAGTCATTTAACCTCTCTAAGTTTGCTTGCCTCATCTGTCAAACAAGAGAGATGAGATAAATTATCT
CCACAGGCATTTTCAGAACTATTCTAGTCTTTTTGGAAATTGGTTTATATTTGTAGAAAAGGTTCAATCTGTTTCTGGCATGGCAGTGACCAAGTCAGAA
TTTCTATTTGGGAGATGAGAAAAACACATTAACAAGATTAATTACTGTAGCTGAAAGATACATAAATATGGATTGGGGTGTATTTTTAATACCACAAAAA
CTTCCATTCCTGAGTTACTTCATTAGCAACTGTTACTTCAACCATCTAGGTTGAGGTTTTCCAGTAATTCTAGGTCAGCAATTATGGACCCTACTTATTT
TCTTTTTTTTATTATACTTTAAGTTCTAGGGTACATGTGCACAATGTGCAGGTCTGTTACATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTA
ACTCATCATTTACATTAGGTATATCTCCTAATGCTATCCCTCCCACCTCCCCCAACCCCATGACAGGCCCCGGTGTGTGACGTTCCCCTTCCTGTGTCCA
AGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACAGGCGGTGTTTGGTTTTCTGTCTTTGCGATAGTTTGCTCAGAATGATGGTTTCCAGCTTCA
TCTATGTCCCTACAAAGGACATGAACTCATTCTTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTACCATTGA
TGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACATGTG

Expression



Full and truncated open reading frames discovered in TCONS_00193640

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.