Detailed information on ENST00000465957

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000512143 platelet-derived growth factor receptor, alpha polypeptide protein coding ENST00000465957 559 272 CDS_UTR Trans

Sequence

>ENST00000512143 (921 nt)
CCGGGCTCCTGCAGGCGGGGCGCTGTGCGCGCCGCGATCCGGTACGTGGGCCTCCGGGCTGTCCCCTCTGGGGGCGGCGATCCTCCCTCCGGAGCCCCCC
TTCAACCCTCCCGGAAGTGAGCATTTGCAGGACCAGGGATGCTGTGCTGCTCTCCCATGAGCCAGTCACCGAGTCGGTCTGCTGCAGCCCTTTCTGAACC
TCTGGCCGTCTGGATGCTCCACTGTGCTTGCCAAGATGAAGTGCGTCTTGGTGGCCACTGAGGGCGCAGAGGTCCTCTTCTACTGGACAGATCAGGAGTT
TGAAGAGAGTCTCCGGCTGAAGTTCGGGCAGTCAGAGAATGAGGAAGAAGAGGTTGGCCTCTTGATGCTCTGAGCTCGGTGACCCCACCCCCACACCCCA
CCAGTCCTCTCTGGACTAAATGAGGGCAAGAAGAAGTCGAATTTTATCACGTAACAGAAGAACTTGGAGCCATCAGTTTCTGTAACCTAAAAAGTTTAAC
AAGGCTGGGCGCGGTGGCTCACGCCTGTAATCACAACACTTTGGGAAGCCAAGGTGGGCCAGTTGCTTGAGCTCAGGGATTTGAGACCAGCCTGGGCAGC
ATGGCGAAACCCTGTCTCTACAAAAAAAATACAAAAATTAGCCAGGTGTGGTGGTGCGTGCCTATAGTCCCAGCTACTTGGGAGGTTGAGGTGGGAGGAT
CACTTGAGTCCAGGTGGTAGAGGCTGCAGTGAGCCGAGACTGTGCCCATGCATTCCAACCTGGGCGACAGAGCAAAAAAAAAAAAAAAAAGTTTAACGTA
AGCTGAACACGTTAATTTTTTAATAGCTGTATTAAGGTATGATTAACATACCATAAATTGCACATATTTAAAGTGCATAATTTGATAAGCTTTGATATGT
ATATACCTATGATTCTATCACA

Expression



Full and truncated open reading frames discovered in ENST00000512143

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.