| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000441159 | family with sequence similarity 115, member C | protein coding | ENST00000468266 | 529 | 162 | CDS | Trans | |
| ENST00000441159 | family with sequence similarity 115, member C | protein coding | ENST00000468266 | 706 | 239 | CDS | Trans | |
| ENST00000518791 | family with sequence similarity 115, member C | protein coding | ENST00000468266 | 706 | 239 | CDS | Trans | |
| ENST00000518791 | family with sequence similarity 115, member C | protein coding | ENST00000468266 | 529 | 162 | CDS | Trans | |
| TCONS_00225245 | family with sequence similarity 115, member C | novel protein coding | ENST00000468266 | 706 | 239 | CDS | Trans | |
| TCONS_00225245 | family with sequence similarity 115, member C | novel protein coding | ENST00000468266 | 529 | 162 | UTR3 | Trans | |
| TCONS_00225248 | family with sequence similarity 115, member C | novel protein coding | ENST00000468266 | 706 | 239 | CDS | Trans | |
| TCONS_00225248 | family with sequence similarity 115, member C | novel protein coding | ENST00000468266 | 529 | 162 | UTR3 | Trans | |
| TCONS_00225256 | family with sequence similarity 115, member D (pseudogene) | novel protein coding | ENST00000468266 | 714 | 239 | CDS | Cis | |
| TCONS_00225256 | family with sequence similarity 115, member D (pseudogene) | novel protein coding | ENST00000468266 | 529 | 162 | CDS | Cis | |
| TCONS_00225257 | family with sequence similarity 115, member D (pseudogene) | novel protein coding | ENST00000468266 | 714 | 239 | CDS | Cis | |
| TCONS_00225257 | family with sequence similarity 115, member D (pseudogene) | novel protein coding | ENST00000468266 | 529 | 162 | UTR3 | Cis | |
| TCONS_00225261 | family with sequence similarity 115, member D (pseudogene) | novel protein coding | ENST00000468266 | 529 | 162 | UTR3 | Cis |
>TCONS_00225261 (462 nt)
CGACACGTCCCCCGGGCGCCACTGCAGAGCCTGTCCGTCAGTCCCTAGGTATCCGCACTGCTCAGGGGAGGATTCCCTGGGAGCACCCACCAGCTGAGAT
CTGCACATCAGCCACAATCCTCTCAGGACGGCGGAAAGGGAAGGGCTCAGCCGCCAGCCTGGCCACAGCCTGCATCATCTCATCCCAGAGGCGGAGCACA
GGCTCGGGGTCCTTCAGGGCCTGAAGGAGGTAGAGCCCGGTACTCACCCAGCAATCATTGTTGCCTGACAAAAGTCACAGAGAAGGCTCAGTTCTTCCTT
CCTATGTGAGTATATCTCCACTTGGGGCCTCCCAGCCCCTCCCAGTGGTACAGCTTCTCCCCTGTGTATCTCAAGTCATCCATACTTCTTAGACTCATCC
CCTCTAAACCTTAAGCAGTGTCCCAATCCCCATCTTCTTGAAAGTACCTGATGAAGAATGGAG
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.