Detailed information on ENST00000470449

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000360304 myosin light chain kinase protein coding ENST00000470449 597 195 CDS Cis
TCONS_00182448 myosin light chain kinase novel protein coding ENST00000470449 597 195 CDS Cis

Sequence

>TCONS_00182448 (759 nt)
AGGTGCGCTTTGCTTCCTAACCCGTTGCCGGGTTGGAGATTCCACCTCCGAAGTTTTCTTTCTGACTTTTGATTTTACATTCCTAGTACAGTGGAGAAGC
CCAGGCGGCCTAGAATCCAGTGTCGTCCGTGAGTGCTTGGCTGGTGTTCAAGTGCATCTTCCAGCCTGAGACCGCGTGGACTCGCTCATCGTGAGGGCGA
GAGGAGGATAAGCCCATTGGGCTGTCGGCTGAGAGTGAGGTGCGGGATTGCTGATGAAATCCTTGGCATCGTCGGAGATCTCATCGAATGCCTCGTCGTC
GAAGTCCCAGGTGGCTGAGGTAACGTTGGCCAAGGTTTCGTTATCGTTGTCTCCCATGAAGGGGGAAAGGCCACTGACTCTGGAGAGACAAGAGCAGGAC
AGCAGGTGTGGCTAGGAGAGGGCGCGACGACCAGATGAGGGAATTGAGGCACAGCCCAGGCTCAAGTCACCTGCCCAAAGATTCACAGCCAGTGAGATTG
GAAGCCAGGTATCTGCCTCTAGAGCCTGTCCTCTTAAATGCTATACTATCCTAACATTTCTGTAAAGATGAAGTAAATTGCAGTGTTCAGCACTGGCACC
AGGCCTGGTCCACAGTAAGGAGGCGGTCCATGCCCGGAGATCTCATGCAGTTCTGCTGGGTTCCCTCCACTGCCTTACCAAGCTGTGAGTGCAGGAATGA
CTTTGTGACCAGCAGCTTAAGCCAAATAAACTTTATAAGGTAAAGAATTTCAAAACAAAA

Expression



Full and truncated open reading frames discovered in TCONS_00182448

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.