Detailed information on ENST00000471371

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000494969 colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) protein coding ENST00000471371 533 241 CDS Trans

Sequence

>ENST00000494969 (3170 nt)
GTGTGTAAGATGTGCAATGTTCCTGCATGGGGGTTTTGTAGACTTTCATAGCCAAAGAAACCGGCTTCGGCTTCTTTAAAATCCCCGACGACTCACCTGA
TTAACCTGCTGCAGTTCTGACCCTGCCAAGAGCTGACAATTTACTGGTTCATCAATGAAACAATATTAAATTATGAAGATGTAAGGAAAAAATCCTACGC
TAACACTGTCGCAGTTTGAAAGCTTTAAAAAGTTGAAGTCTATTGGAAACCTTCTTATAAGAAACCTTCCTAGTCAGAGAATTCAACTTTCTTCTTTTCT
TCATTCATGAAAATGCAGATCCACTGAGAAAGGGAATAAGGTAAAAGTATCATTTTCCTTTGGGAATCAGGTTTTTCTGTCAGAGGAATAAAGGCCTTTC
TTTCCAGGTCAATTCCTGTTGTGCTGAAGGCTGGGAATCATCACGCCCTTTTGGTGTGGGCCCCAGCTTTGAGCCTCTGTGATGATGGTAGAATCTGGAA
GTCAGAAGCCCATATCCTAGATCAGCTGCTTTGCTGGGCTGACCTTCAGTGTGATCCTGCATCCCAAACTCCTGACCTCTCCAGAGAACTTGGGGTGTTC
TCCCAAGATGCTGGGCCTCTGGGAAGCATCTCCTTAGGTGAACAGCCCCAGATGCCTCCTTCTTAAGTTGGTCTGTTACTCCACGCTGACTATCAACCCC
CAAGTGTGAAAGATCACGTTTATTCCTGAGGGAAACACGGAGTTGTTCCTAACTCTACTTTGCCTTCTTAGAACACGTTTGCTTCTGGTTGAAATGAAAA
TTTTCAGTAAAGTGTTTTGGTTTTTTTTTTCTGTATTATTTTTGTTTTTTTATTTCCTTAAACCTCTGTTTTGGGTGAAGCACTACAGCAGAAGTCTAGT
GTCATACAAAAGTACAACTGGAATCTTTGAATGTAACCCTCATCCAATAGCAGACATTTAAAAAATCACTCTTATAAATGTTTTAAATGTGTTCCAAACA
GCATTGACCTCCTCAATAGGTAATTTTGTTAAAGGACTGGGCTTTGGCTGTTTTTTTTTTTTTTTTTCTGACTTGTTGATTTAGAGACCAGCTGCCTCCT
AGGAAATTGTGATCAAAAGCTATAAAAGCAGACCATAACTATGTCAAATGCATGAGTAGGAATTGGGAAACTTGATTTGTCCTGTGATTCAATCTGGGTT
AAAGATTGGTGCCACTTGAAATTACTATCCTTAGGGAAGTCATTAACAACCCCCCAAATGTTTGTATGTGCCTGTATGCAAGTGTATGTTGTATATTTAC
AATTTCATCCCATGTTCTGTCTCTCCAATTTTATGATTCTAGCTTTGGTGACCTCTGACTCCTCCTTCTCTATTCCTAACACTGTGTAACTTAGAGAGGA
TCAGGGAAGCTAGGATGTCCCAAATGCAATTTCATTAAATTAAAGAGAAATACACTAAGAAGTAGAAAAAATGTGATGAGTGTGATAAAATGATTTAGTG
CAAGATGGCGGATGCAGTAGAGACAAGGAGCACAGAGTAGGAGCTTCCTGTGCAGCAGGGTGAGCAGAAGTATGCCCAGGAAAGTTCTGCAAATAGGTAC
TGTCTATCCCAGGCTTAAAAGGCAAATTAGAATTAGCCAGATGAAAGTGAGCAGGTAGGACAAAAAGTGTTGCAGAGGGAATAGCAAAGAACAAAGCCCA
TGACTCCTGAGAAAGAAAAACTATTTTTATTTATTTTAAACCTACAATAATAACTATTTCTCAAAAGGGTATAGGAGAAGAATAATTGAAAATATGGCAG
AAAGTGGAAATAAAAGGTTTGACTAATTGGACTATACCCTTGCCCTATTCTTAACTTATTCACTGGTTTGATATTTAATTGCTCTCTAAGAGGATATTGA
CTGTCTCTATGCCAGTGAATTCTGCAACTAGGTAGTATGAGATCTACTTGAAAACTGTGGAATTTTCAGTAGGAACATAGAAAAATTTTGAAGGAAAGAA
ATTCTGAGAATAAAATAAAATTTTATTCACTTGAATTCTATTTCATTGTGAGCTTAAGGAAAAAATAAAGCTTTTCAAAAAATGCTATAATTTCTCTATT
TTCTAAATTGGCCCTTTATTCTACATTGTCCTATTCTCATATATATCAGTGATTCTAAAAGTGTGGTCCTGGGACCAGCACCATCAGCATTCACAGAGAG
CCTGTTAGAAATGCAGATCCTTAAGCTCCATCCCAGGCCTACTGAATCAGAAACTCTGGGCATCGGACCCAACAATCTATGCTTTTACACTCCCTCCAGG
CAATTCTGATGGGTATCAAAGTTTAAGAATCACTGGTCTCTACTTTTTTTCATGTATTTTGTACAAAACAGTTTATATTATCTTCTTATTCATTACATTA
ATTTTGTACATATATTTTCTTTCAATAATTAACTTTTAAATTCCTTATGGACAATAATCTTATCTTTGTTTGTACCAGCTCTATGAGTTATAACTGAAAT
ATAATAAACTGCACATTACAGTATATAATTGGATCCATTTTGACGTACATATACATCCATGAAACCAATACCTTAATCAACGTAATAAACGGGGATCTCA
CCCCAAAAGTTTTCTTTTGCTACCTTATAATCCTTTTCTCTGACCCCTTTACTGACCTACTTCCCCCATCTCAAGGCTAATCACTTATCTGCTTTTTGCC
TCTATGGATAAGTCTGCATTTTGTAGACTTTCATGTAAGTGGAATCCTACAGTATATATTCTTTTTTATCTGGTTTGTCTCAATCAGTATAATTATTTTA
ACATATATCCATGTTGTTGAATCAGTAGTTAGTTCCTTTTTATTACTGAGGTACCATCAAATTGTATAAGCTACGATGTGTTTATTAAGTTACTGTCAGT
GGATTTTTGTGTTATTTTAGCCTGGGCTTTTGGGGGGGTCACGAGGTCATGAGCTCGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAA
ATACAAAAATTAGCTGGGCATGGTGGCACGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGTAGGAGAATCACTTGAACCCAAGAGACGGAGGTTGCA
GTGAGCCAAGATCACGCCACCGTACTCCAGCCAGGGCAACAGAGCAAGATTCTGTCTAAAAAAAAAAAAAA

Expression



Full and truncated open reading frames discovered in ENST00000494969

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.