| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000276431 | tumor necrosis factor receptor superfamily, member 10b | protein coding | ENST00000473383 | 544 | 277 | UTR3 | Trans | |
| ENST00000338758 | parvin, beta | protein coding | ENST00000473383 | 628 | 282 | UTR3 | Trans | |
| ENST00000494969 | colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) | protein coding | ENST00000473383 | 588 | 284 | CDS | Trans | |
| ENST00000511184 | E74-like factor 2 (ets domain transcription factor) | nonsense mediated decay | ENST00000473383 | 591 | 287 | CDS_UTR | Trans | |
| ENST00000572705 | transient receptor potential cation channel, subfamily V, member 1 | protein coding | ENST00000473383 | 612 | 280 | UTR3 | Trans | |
| ENST00000593250 | centrosomal protein 76kDa | nonsense mediated decay | ENST00000473383 | 551 | 285 | UTR3 | Trans | |
| ENST00000620139 | melanoregulin | protein coding | ENST00000473383 | 557 | 284 | UTR3 | Trans | |
| TCONS_00034643 | CD82 molecule | novel protein coding | ENST00000473383 | 605 | 282 | UTR3 | Trans | |
| TCONS_00065093 | UBA domain containing 2 | novel protein coding | ENST00000473383 | 660 | 280 | UTR5 | Trans | |
| TCONS_00065094 | UBA domain containing 2 | novel protein coding | ENST00000473383 | 616 | 309 | UTR5 | Trans | |
| TCONS_00065094 | UBA domain containing 2 | novel protein coding | ENST00000473383 | 660 | 280 | UTR5 | Trans | |
| TCONS_00065097 | UBA domain containing 2 | novel protein coding | ENST00000473383 | 616 | 309 | UTR3 | Trans | |
| TCONS_00065103 | UBA domain containing 2 | novel protein coding | ENST00000473383 | 616 | 309 | UTR5 | Trans | |
| TCONS_00065103 | UBA domain containing 2 | novel protein coding | ENST00000473383 | 660 | 280 | UTR5 | Trans | |
| TCONS_00067572 | DCN1, defective in cullin neddylation 1, domain containing 2 | novel protein coding | ENST00000473383 | 615 | 285 | UTR3 | Trans | |
| TCONS_00070307 | pecanex homolog (Drosophila) | novel protein coding | ENST00000473383 | 602 | 276 | UTR5 | Trans | |
| TCONS_00075813 | forkhead box N3 | novel protein coding | ENST00000473383 | 643 | 282 | UTR5 | Trans | |
| TCONS_00075827 | forkhead box N3 | novel protein coding | ENST00000473383 | 643 | 282 | UTR3 | Trans | |
| TCONS_00107851 | transient receptor potential cation channel, subfamily V, member 1 | novel protein coding | ENST00000473383 | 612 | 280 | UTR3 | Trans | |
| TCONS_00107851 | transient receptor potential cation channel, subfamily V, member 1 | novel protein coding | ENST00000473383 | 612 | 274 | UTR5 | Trans | |
| TCONS_00107864 | transient receptor potential cation channel, subfamily V, member 1 | novel protein coding | ENST00000473383 | 612 | 274 | UTR3 | Trans | |
| TCONS_00109011 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000473383 | 556 | 283 | UTR5 | Trans | |
| TCONS_00109427 | serine hydroxymethyltransferase 1 (soluble) | novel protein coding | ENST00000473383 | 611 | 282 | UTR3 | Trans | |
| TCONS_00124891 | zinc finger protein 540 | novel protein coding | ENST00000473383 | 618 | 283 | UTR3 | Trans | |
| TCONS_00161618 | interferon gamma receptor 2 (interferon gamma transducer 1) | novel protein coding | ENST00000473383 | 601 | 282 | UTR3 | Trans | |
| TCONS_00190276 | transmembrane protein 144 | novel protein coding | ENST00000473383 | 609 | 283 | UTR3 | Trans | |
| TCONS_00202828 | myotubularin related protein 12 | novel protein coding | ENST00000473383 | 644 | 283 | UTR3 | Trans | |
| TCONS_00249092 | transmembrane protein 245 | novel protein coding | ENST00000473383 | 605 | 277 | UTR5 | Trans |
>TCONS_00249092 (707 nt)
CGGGTGTGGTGGCTCAACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGACGGATCATGAGGTCAGGAGTTCGAGACCAGCCTGACCAACATGGTA
AAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGTCTGGTGGTGCCTGCCTGTAATCCCAGCTACTTGTGAGGCTGAGGCAGGAGAATTGCTTGAA
CCCAGGAGGCAGAGGTTGCAGTGACCCGAGATCGCACTACTGCACTCCAGCTTGGGCAACAGAGTGAGACTCAGTCTAAAAAATCATAAATAAATAATAA
AAAGAAAAGCACCTGGTTGCAGTGCTGTTAAATTGATTGAGGCCTTAAAATTTGTATTTATCATACTGAATTTATTTTGACTTTGCCTGCTATCAAATTT
TCTTTCTTGCAGTGGATTGTATTACACAGAGCATGAATATACTTCTTTAGGTTACACGCATGGGGAGATACTCTGGAGGAAGCATTTGAGCAATGTGCAA
TGGCCATGTTTGGTTACATGACAGATACTGGGACAGTGGAGCCCCTCCAAACAGTAGAAGTAGAAACCCAAGGAGATGACTTACAGTCTCTTCTGTTTCA
CTTTTTGGATGAATGGCTTTATAAGTTCAGTGCTGATGAATTCTTCATACCCCGGGAAGTGAAAGTACTTAGCATTGATCAAAGAAATTTCAAATTACGA
TCAATTGG
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.