| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000327473 | tumor necrosis factor, alpha-induced protein 8-like 1 | protein coding | ENST00000474465 | 503 | 445 | UTR3 | Trans | |
| ENST00000353047 | cathepsin B | protein coding | ENST00000474465 | 774 | 518 | UTR3 | Trans | |
| ENST00000442007 | antisense | antisense | ENST00000474465 | 731 | 500 | noncoding | Trans | |
| ENST00000621141 | G protein-coupled receptor 1 | protein coding | ENST00000474465 | 507 | 278 | UTR3 | Trans | |
| TCONS_00030588 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | ENST00000474465 | 792 | 534 | UTR3 | Trans | |
| TCONS_00030591 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | ENST00000474465 | 827 | 495 | UTR3 | Trans | |
| TCONS_00065859 | ubiquitin specific peptidase 12 | novel protein coding | ENST00000474465 | 618 | 273 | UTR3 | Trans | |
| TCONS_00103261 | Rap guanine nucleotide exchange factor (GEF)-like 1 | novel protein coding | ENST00000474465 | 625 | 450 | UTR5 | Trans | |
| TCONS_00103262 | Rap guanine nucleotide exchange factor (GEF)-like 1 | novel protein coding | ENST00000474465 | 625 | 450 | UTR5 | Trans | |
| TCONS_00109427 | serine hydroxymethyltransferase 1 (soluble) | novel protein coding | ENST00000474465 | 648 | 378 | UTR3 | Trans | |
| TCONS_00118582 | centrosomal protein 76kDa | novel protein coding | ENST00000474465 | 836 | 509 | UTR3 | Trans | |
| TCONS_00194655 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | ENST00000474465 | 650 | 525 | UTR3 | Trans | |
| TCONS_00194686 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | ENST00000474465 | 728 | 527 | UTR3 | Trans | |
| TCONS_00237101 | cathepsin B | novel protein coding | ENST00000474465 | 774 | 518 | UTR3 | Trans | |
| TCONS_00237103 | cathepsin B | novel protein coding | ENST00000474465 | 774 | 518 | UTR3 | Trans | |
| TCONS_00243477 | osteoclast stimulating factor 1 | novel protein coding | ENST00000474465 | 787 | 514 | UTR5 | Trans | |
| TCONS_00243482 | osteoclast stimulating factor 1 | novel protein coding | ENST00000474465 | 787 | 514 | UTR5 | Trans |
>TCONS_00243482 (624 nt)
TGAGGACTGACTGGGGTTCTGAGACTCCCTGTCCCGGACCGCAGCGTTAAAAGGATCTGAACAAAGTCTGCTCAAATCTCCTGCTGTGAACCAGCAGAAT
TTTTGAACAGAGTTGCACTCTTGCTGCCGAGGCTGGAGCACAATGGCGTGATCTCGGCTCACCACATCCTCTGCCTCCTGGGCTCAAGCAGTTCTGCCTC
AGCCTCCCGAGTAGCTGGGATTACAGGCATGCGCCACCACACCCCGCTAATTTTGTATTTGTAGTAGAGACAGGGTTTCTCCATGTTGGTCAGGCAGGTC
TCAAATTCCCGACCTCAGGTTATCCGCCCGCCTTGGCCTCCCAAAGTACTGGGATTACAGGCGTGAGCCACCGTGTGTGGCCTTTATTTTTATTTTTTGA
GATGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGCACGATCTTGGCTCACTGCAACCTCCGTTTCCTGGGTTCAAGCGATTCTCCTGCCTCAG
ACTCCCGAGTAGCTGGGATTGCAGGTGTGTGCTACCACACCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTC
TGGAACTCCCGACCTCAGGTGATCC
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.