Detailed information on ENST00000474641

lncRNA-RNA interactions

Number of interactions: 3

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000370888 leucine rich repeat containing 1 protein coding ENST00000474641 718 245 CDS Cis
TCONS_00210928 leucine rich repeat containing 1 novel protein coding ENST00000474641 718 245 UTR3 Cis
TCONS_00210939 leucine rich repeat containing 1 novel protein coding ENST00000474641 718 245 UTR5 Cis

Sequence

>TCONS_00210939 (455 nt)
AGAGGCAAAGAATCTGCATTTCCATACCGTCTCATTGTCTTCTTCATCTTTCTCATCCTCCACAAATCGGATCGCACTGACTCTGTTGACAGCACGCTCG
TTCCAGGCTTCATCAGAGACATCATTTACCAAGTTCTCCAGTGCACCACAGCGAGGCAGATTCTCTGCAGTGACAAAGACCACATAAGCAGGGAATTGCG
TTTCATGTGATCAGTAAATGCTATGAACTTTGCGGCTGACAAGGTTTCAATGTAAAGAGAGAAAGTCAAGGTGATTTTGGAAGGACCCAGAAGGAGGAGT
TCTTTACCTCTGATGGCCACAGCCTCACTGACAGGGCTGGTGTGAAGCTGCAGGATTACCTGTTTCCAGGAGCACCTGATGAATCAGGCCAAGAGGAAGG
AGGTGCCTGCGGTGTCAAAGCATTTAAGTTGCAGCCAAAATAAAGATTAAACACCA

Expression



Full and truncated open reading frames discovered in TCONS_00210939

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.