Detailed information on ENST00000477173

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00095053 epithelial membrane protein 2 novel protein coding ENST00000477173 533 241 UTR3 Trans

Sequence

>TCONS_00095053 (544 nt)
ATTTCAGTGGCTGTGGCAACAGATAAAGGCTTACTTACTCCAATCATAAAAGATGCTGCTGCTAAAGGTATCCAGGAAATTGCTGACTCTGTAAAGGCTC
TATCAAAGAAAGCAAGAGATGGAAAATTGTTGCCTGAAGAATACCAAGGAGGATCTTTTAGATGGAGTCTGGCTCTGTCGCCCAGGCTGCAATGCAGTGG
TATGATCTAGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACCCACCACCATGCC
TGGCTGATTTTTGTATTTTTAGTAGAGACGAGGTTTCACCATGTTGACTGGGCTGGTCTCAAACTCCCAACCTCAGATGATCTGCCTGCCTCAGCCTCGC
AAATAAGAATATATTTCAGTGTCTTCTTGTTTACTAGCTTTGTTTCTATTAATGGCAGTTCTCCAAAATCTTCAAGAGCTACACTTTGGGAACTTTCCAT
TTATTGTATACTTTAATTAAAGGTTTCCAACTGATTTTAAATTAA

Expression



Full and truncated open reading frames discovered in TCONS_00095053

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.