| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000511184 | E74-like factor 2 (ets domain transcription factor) | nonsense mediated decay | ENST00000479275 | 517 | 295 | CDS_UTR | Trans | |
| ENST00000620139 | melanoregulin | protein coding | ENST00000479275 | 529 | 296 | UTR3 | Trans | |
| TCONS_00023682 | pre-mRNA processing factor 18 | novel protein coding | ENST00000479275 | 602 | 271 | UTR3 | Trans | |
| TCONS_00023685 | pre-mRNA processing factor 18 | novel protein coding | ENST00000479275 | 602 | 271 | UTR3 | Trans | |
| TCONS_00023687 | pre-mRNA processing factor 18 | novel protein coding | ENST00000479275 | 602 | 271 | UTR3 | Trans | |
| TCONS_00023689 | pre-mRNA processing factor 18 | novel protein coding | ENST00000479275 | 602 | 271 | UTR3 | Trans | |
| TCONS_00027001 | programmed cell death 4 (neoplastic transformation inhibitor) | novel protein coding | ENST00000479275 | 566 | 289 | UTR3 | Trans | |
| TCONS_00027009 | programmed cell death 4 (neoplastic transformation inhibitor) | novel protein coding | ENST00000479275 | 566 | 289 | UTR3 | Trans | |
| TCONS_00030130 | calcium/calmodulin-dependent protein kinase II gamma | novel protein coding | ENST00000479275 | 634 | 284 | UTR3 | Trans | |
| TCONS_00083866 | RAB27A, member RAS oncogene family | novel protein coding | ENST00000479275 | 602 | 292 | UTR5 | Trans | |
| TCONS_00114623 | glutamine rich 2 | novel protein coding | ENST00000479275 | 614 | 296 | UTR5 | Trans | |
| TCONS_00114628 | phosphoribosyl pyrophosphate synthetase-associated protein 1 | novel protein coding | ENST00000479275 | 614 | 296 | UTR5 | Trans | |
| TCONS_00147093 | ATPase family, AAA domain containing 2B | novel protein coding | ENST00000479275 | 631 | 301 | UTR3 | Trans | |
| TCONS_00168219 | THO complex 5 | novel protein coding | ENST00000479275 | 556 | 272 | UTR3 | Trans | |
| TCONS_00168220 | THO complex 5 | novel protein coding | ENST00000479275 | 556 | 272 | UTR3 | Trans | |
| TCONS_00186316 | KIAA0232 | novel protein coding | ENST00000479275 | 617 | 283 | UTR3 | Trans | |
| TCONS_00204896 | erythrocyte membrane protein band 4.1 like 4A | novel protein coding | ENST00000479275 | 602 | 297 | UTR5 | Trans | |
| TCONS_00221037 | POU class 6 homeobox 2 | novel noncoding | ENST00000479275 | 622 | 296 | noncoding | Trans |
>TCONS_00221037 (1682 nt)
AGTAAGGGAGTACCACCAGTGTTTTAAAGACCCTATCTGTGGTTTGTGTCTCACTTTAAGGCTCAACTGCATCTTGGCTAATGTGATTCCTACTTAAAAC
TGAATGTGATCACTGTTGATGGGTATTGGAGCAGTTTCTGCACATAGATTCCATGTCGGGGCTTTGTTTTCTGTGAGAGCAGATGAGATGGAGTGATGAA
AGAAGCTTCAATTCCTAAGCTCAGTTAATTAAGTTTCATTGCATCTGTGAGTGGAGAGTTTTAATGGTCTGGAAAGAGAAAATTAAGACAAGAAAAAGCT
TGTTTTACTAGATAGATACTGGTCTGGGTGGGCCATTATTCTGATATGTTGTATTTGGGATTTTTATTTGTGGTCAGTGGTTTGAAAATAGTCACTCAGT
CTAGGCAACATTGCAAGACTTCGTCTCTACTGAAAATTAGAAACAAATTAGTTGGGTGTGGTGGCTTGCATCTGTACTCCTAGCTACTTGGGATGCTAAG
GTAAGAGAATTGCTTGAGCCCAGGAGATCAAGGCTGCAGTGAGCCACTGCACTTTTTGGGGATCATACCATTGCACTCCAGCCTGGGCAGTGAGCAAGAC
CCTGTCTCATTTAAAAAAAAAAAAAACAAAAACAGTCTTGGCACAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGCGGATCATTT
GAGGTCAGGAGTTCGAGATCAGCCTGACCAATGTGGTGAAACCCCATCTCTACTAAAAATGCAAAAGATTAGCCAGGGGTGGTGACAAGCGCCTGTAATC
CCAGCTACTTGGGAGGCTGAGACACTTGAATCACTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCTGAGATTACGCCACTGCACTCCAGCCTGGGCAACA
GAGCGAGACTCCTTCTCCAAAGAAATAGAAAAAGGTAGTCACCCAGGAATCCATTTCTTAGGCTCCAAGAAGGTTGGTACCAGGAGGCTGTCAGGCCTAG
CACTCAAGGACCTGACTGCTCCACGCAGTTGACAAAATGTGATTCATTACTAAAGTGTGACATGCAGTAATGGGGATTTGTTAACATTTCGGATGAGGCA
TTACTTTATCCAGGTACATAGCCACCGCCATCTTCCTATTGTACATTTCCAGTGACCTGTCCTCCTTTTGTCTCCAGAGGGGTCTGGTTGCTGCTTACAG
TGGTGACAGTGACAATGAGGAGGAGCTGGTGGAGAGACTTGAGAGTGAGGAAGAGAAGCTAGCTGACTGGAAGAAGATGGCCTGTCTGCTCTGCCGGCGC
CAGTTCCCGAACAAAGATGCCCTAGTCAGGCACCAGCAACTCTCAGACCTTCACAAGCAAAACATGGACATCTATCGACGATCCAGGCTGAGCGAGCAGG
AGCTGGAAGCCTTGGAGCTAAGGGAGAGAGAGGTGAATGGGAAACTGTGCCACAAGGAAGAGGATATTGGGATAATTGCCTTTAGCTTTTATTTGTAGCA
TTTAGTTCCAGATCCCAGGGGCAGGGTAGGAGGATTTGTCATACCCTTGTCATCTGACCATTGTAGTTCATGTAGCCTAGACCCAGCCTCTGTGTGCCTT
GTGAGCCTCACATTGTCCCTTCATCATAAGGGTGCACAAGGCAGAAGCACACTGCCGAGACTCTCTCACAGCAATGCCAGAGC
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.