| Potential function |
Interacting transcript |
Gene description |
Transcript biotype |
lncRNA id |
Alignment score (LAST) |
Alignment length |
Transcript region involved in interaction |
Genomic orientation of interacting RNAs |
|
|
ENST00000261653 |
syntaxin 2 |
protein coding |
ENST00000481349 |
603 |
275 |
UTR3 |
Trans |
|
|
ENST00000263955 |
serine/threonine kinase 17b |
protein coding |
ENST00000481349 |
593 |
281 |
UTR3 |
Trans |
|
|
ENST00000338758 |
parvin, beta |
protein coding |
ENST00000481349 |
643 |
261 |
UTR3 |
Trans |
|
|
ENST00000392373 |
syntaxin 2 |
protein coding |
ENST00000481349 |
603 |
275 |
UTR3 |
Trans |
|
|
ENST00000448612 |
WD repeat domain 27 |
protein coding |
ENST00000481349 |
550 |
288 |
CDS |
Trans |
|
|
ENST00000467462 |
inter-alpha-trypsin inhibitor heavy chain family, member 4 |
processed transcript |
ENST00000481349 |
545 |
283 |
noncoding |
Trans |
|
|
ENST00000569455 |
cadherin 13 |
processed transcript |
ENST00000481349 |
579 |
289 |
noncoding |
Trans |
|
|
ENST00000593250 |
centrosomal protein 76kDa |
nonsense mediated decay |
ENST00000481349 |
573 |
286 |
UTR3 |
Trans |
|
|
ENST00000620139 |
melanoregulin |
protein coding |
ENST00000481349 |
606 |
281 |
UTR3 |
Trans |
|
|
TCONS_00010354 |
TNF receptor-associated factor 5 |
novel protein coding |
ENST00000481349 |
502 |
274 |
UTR3 |
Trans |
|
|
TCONS_00034643 |
CD82 molecule |
novel protein coding |
ENST00000481349 |
606 |
282 |
UTR3 |
Trans |
|
|
TCONS_00038233 |
protease, serine, 23 |
novel protein coding |
ENST00000481349 |
621 |
274 |
UTR3 |
Trans |
|
|
TCONS_00065093 |
UBA domain containing 2 |
novel protein coding |
ENST00000481349 |
641 |
276 |
UTR5 |
Trans |
|
|
TCONS_00065094 |
UBA domain containing 2 |
novel protein coding |
ENST00000481349 |
641 |
276 |
UTR5 |
Trans |
|
|
TCONS_00065103 |
UBA domain containing 2 |
novel protein coding |
ENST00000481349 |
641 |
276 |
UTR5 |
Trans |
|
|
TCONS_00067572 |
DCN1, defective in cullin neddylation 1, domain containing 2 |
novel protein coding |
ENST00000481349 |
625 |
285 |
UTR3 |
Trans |
|
|
TCONS_00070307 |
pecanex homolog (Drosophila) |
novel protein coding |
ENST00000481349 |
612 |
279 |
UTR5 |
Trans |
|
|
TCONS_00075813 |
forkhead box N3 |
novel protein coding |
ENST00000481349 |
634 |
283 |
UTR5 |
Trans |
|
|
TCONS_00075827 |
forkhead box N3 |
novel protein coding |
ENST00000481349 |
634 |
283 |
UTR3 |
Trans |
|
|
TCONS_00082423 |
transcribed_processed_pseudogene |
novel protein coding |
ENST00000481349 |
616 |
283 |
UTR3 |
Trans |
|
|
TCONS_00095049 |
epithelial membrane protein 2 |
novel protein coding |
ENST00000481349 |
513 |
276 |
UTR3 |
Trans |
|
|
TCONS_00109011 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000481349 |
585 |
283 |
UTR5 |
Trans |
|
|
TCONS_00109427 |
serine hydroxymethyltransferase 1 (soluble) |
novel protein coding |
ENST00000481349 |
604 |
284 |
UTR3 |
Trans |
|
|
TCONS_00123889 |
ribosomal protein SA pseudogene 58 |
novel protein coding |
ENST00000481349 |
634 |
272 |
UTR5 |
Trans |
|
|
TCONS_00123899 |
ribosomal protein SA pseudogene 58 |
novel protein coding |
ENST00000481349 |
634 |
272 |
UTR5 |
Trans |
|
|
TCONS_00124891 |
zinc finger protein 540 |
novel protein coding |
ENST00000481349 |
637 |
284 |
UTR3 |
Trans |
|
|
TCONS_00135631 |
zinc finger protein 841 |
novel protein coding |
ENST00000481349 |
521 |
285 |
UTR3 |
Trans |
|
|
TCONS_00141404 |
GLI family zinc finger 2 |
novel protein coding |
ENST00000481349 |
604 |
274 |
UTR5 |
Trans |
|
|
TCONS_00148698 |
WD repeat containing planar cell polarity effector |
novel noncoding |
ENST00000481349 |
673 |
280 |
noncoding |
Trans |
|
|
TCONS_00148704 |
WD repeat containing planar cell polarity effector |
novel protein coding |
ENST00000481349 |
673 |
280 |
UTR3 |
Trans |
|
|
TCONS_00148705 |
WD repeat containing planar cell polarity effector |
novel protein coding |
ENST00000481349 |
673 |
280 |
UTR3 |
Trans |
|
|
TCONS_00152107 |
cordon-bleu WH2 repeat protein-like 1 |
novel protein coding |
ENST00000481349 |
605 |
283 |
UTR5 |
Trans |
|
|
TCONS_00152126 |
cordon-bleu WH2 repeat protein-like 1 |
novel protein coding |
ENST00000481349 |
605 |
283 |
UTR5 |
Trans |
|
|
TCONS_00152127 |
cordon-bleu WH2 repeat protein-like 1 |
novel protein coding |
ENST00000481349 |
605 |
283 |
UTR5 |
Trans |
|
|
TCONS_00153158 |
serine/threonine kinase 17b |
novel protein coding |
ENST00000481349 |
593 |
281 |
UTR3 |
Trans |
|
|
TCONS_00161618 |
interferon gamma receptor 2 (interferon gamma transducer 1) |
novel protein coding |
ENST00000481349 |
612 |
282 |
UTR3 |
Trans |
|
|
TCONS_00185516 |
transcribed_unprocessed_pseudogene |
novel protein coding |
ENST00000481349 |
605 |
284 |
UTR3 |
Trans |
|
|
TCONS_00185519 |
transcribed_unprocessed_pseudogene |
novel protein coding |
ENST00000481349 |
605 |
284 |
UTR3 |
Trans |
|
|
TCONS_00190276 |
transmembrane protein 144 |
novel protein coding |
ENST00000481349 |
601 |
283 |
UTR3 |
Trans |
|
|
TCONS_00202516 |
family with sequence similarity 173, member B |
novel protein coding |
ENST00000481349 |
601 |
278 |
UTR5 |
Trans |
|
|
TCONS_00202828 |
myotubularin related protein 12 |
novel protein coding |
ENST00000481349 |
654 |
284 |
UTR3 |
Trans |
|
|
TCONS_00203663 |
ribosomal protein L3 pseudogene 6 |
novel protein coding |
ENST00000481349 |
655 |
288 |
UTR3 |
Trans |
|
|
TCONS_00203663 |
ribosomal protein L3 pseudogene 6 |
novel protein coding |
ENST00000481349 |
554 |
253 |
UTR3 |
Trans |
|
|
TCONS_00203984 |
family with sequence similarity 169, member A |
novel protein coding |
ENST00000481349 |
618 |
285 |
UTR5 |
Trans |
|
|
TCONS_00203985 |
family with sequence similarity 169, member A |
novel protein coding |
ENST00000481349 |
618 |
285 |
UTR5 |
Trans |
|
|
TCONS_00203988 |
family with sequence similarity 169, member A |
novel noncoding |
ENST00000481349 |
618 |
285 |
noncoding |
Trans |
|
|
TCONS_00213191 |
tubby like protein 4 |
novel protein coding |
ENST00000481349 |
619 |
271 |
UTR5 |
Trans |
|
|
TCONS_00213191 |
tubby like protein 4 |
novel protein coding |
ENST00000481349 |
627 |
283 |
UTR5 |
Trans |
|
|
TCONS_00234854 |
zinc finger and BTB domain containing 10 |
novel protein coding |
ENST00000481349 |
608 |
275 |
UTR3 |
Trans |
|
|
TCONS_00235205 |
epithelial splicing regulatory protein 1 |
novel protein coding |
ENST00000481349 |
600 |
284 |
UTR3 |
Trans |
|
|
TCONS_00235219 |
epithelial splicing regulatory protein 1 |
novel protein coding |
ENST00000481349 |
600 |
284 |
UTR3 |
Trans |
|
|
TCONS_00235231 |
epithelial splicing regulatory protein 1 |
novel protein coding |
ENST00000481349 |
600 |
284 |
UTR3 |
Trans |
|
|
TCONS_00235281 |
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 |
novel protein coding |
ENST00000481349 |
610 |
284 |
UTR5 |
Trans |
|
|
TCONS_00239255 |
tumor protein D52 |
novel protein coding |
ENST00000481349 |
617 |
283 |
UTR5 |
Trans |
|
|
TCONS_00239255 |
tumor protein D52 |
novel protein coding |
ENST00000481349 |
618 |
264 |
UTR3 |
Trans |
|
|
TCONS_00244033 |
WNK lysine deficient protein kinase 2 |
novel protein coding |
ENST00000481349 |
624 |
282 |
UTR5 |
Trans |
|
|
TCONS_00244038 |
WNK lysine deficient protein kinase 2 |
novel protein coding |
ENST00000481349 |
624 |
282 |
UTR5 |
Trans |
|
|
TCONS_00244055 |
WNK lysine deficient protein kinase 2 |
novel protein coding |
ENST00000481349 |
624 |
282 |
UTR3 |
Trans |
|
|
TCONS_00244067 |
WNK lysine deficient protein kinase 2 |
novel protein coding |
ENST00000481349 |
624 |
282 |
UTR5 |
Trans |
|
|
TCONS_00245543 |
long intergenic non-protein coding RNA 963 |
novel protein coding |
ENST00000481349 |
611 |
283 |
UTR3 |
Trans |
|
|
TCONS_00249092 |
transmembrane protein 245 |
novel protein coding |
ENST00000481349 |
614 |
283 |
UTR5 |
Trans |
|
|
TCONS_00252827 |
discs, large homolog 3 (Drosophila) |
novel protein coding |
ENST00000481349 |
639 |
284 |
UTR5 |
Trans |