Detailed information on ENST00000482484

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000620139 melanoregulin protein coding ENST00000482484 509 242 UTR3 Trans
TCONS_00101169 myosin phosphatase Rho interacting protein novel protein coding ENST00000482484 528 232 UTR3 Trans

Sequence

>TCONS_00101169 (763 nt)
AGAGCAGAAGTTGCACTTTTAGGGTAAGGAAAGAAGGGGCGGAGCTCTAGAGCAGTTCATCACTTAAAATTTTTGAGAAGCCCAAAGGAAAGGACTGGAA
AGGAAGGCCAACCCAGAGAGTACTACACATTGGATTCCATTTTATTTCTACTTAATAACGTGCACCTTTCTCATCCTGTTTATGTCCGACGTGCAGCTTG
GCGTGATCTCGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGGGATTCTCCTGCCTCAGCCTCCCAAGTAGCTAGAATTACAGGCACACGCCACCATGC
CTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGGTTCACCACGTTAGCCAGGTTGGTCTTGATTTCCTGACCTCGCGATCCGCCCGCCTCGACCTCCCA
AAGTGTTGGGATTACAGGCGTGAGCCACTGCGTCCGGCTGAGCAGACCACTCTGAAAACAGATTCCTGATCCTTAGTTCCTATTTTAGTACTGAAAATAT
TCCTGTGGTTAGAAGACCTGATCGAAAAGATCTACTTGGATATCTCAATGGTGAAGCGTCAACATCGGCAAGTATAGACAGAAGCGCTCCCTTAGAAATA
GGTCTTCAGCGATCTACTCAAGTCAAACGAGCTGCAGATGAAGTTTTAGCAGAAGCAAAGAAACCACGAATTGAGGATGAAGAGTGTGTGCGCCTTGATA
AAGAGAGATTGGCTGCCCGTTTGGAGGGTCACAAAGAAGGGATTGTACAGACTGAACAGATTAG

Expression



Full and truncated open reading frames discovered in TCONS_00101169

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.