Detailed information on ENST00000483032

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000498813 delta(4)-desaturase, sphingolipid 1 processed transcript ENST00000483032 526 293 noncoding Trans

Sequence

>ENST00000498813 (832 nt)
TCAAGGTCCTCCAAGGCTGTGCAGACTGCCTTCCCCAGGAGATCACCGAGCTCAAGACACAGATGTGGCAGCTCCTCAAGGGCCACGACCACCTGCAGGA
TGAGTTTTCTATCTTCTTTGACCACTTGCGCCCAGCAGCTAGCCGGATGGGTGACTTTGAAGAGATCAATTGGACTGAGGAAAAGGAGTATGAGGTATAG
GACCTAAGGCTGCTGTAGCCTTATGAAGGGGGAAGGCCACACGTGGGAGGGATATTGGCCTGGTGTCTGTGCTCAGCAGCACCAACTCCTTCTCAGTTTG
ATGGCTTTGAAGAAGTGGCCCTGCCTGATGTGGAAGAAGAGGAGGAGCCTCCCAAGATACCCACAGCCTCAAAGAACAAGAGGAAAAAAGAGATCGGGGT
CCAAAATCATGATAAGGTATTTTCTTTGTTTATTTGTTTGTTTTTGAGACAGAATCTCGCTCTGTCACCCAAACTAGAGTGCAGTGGCGTAATCTTGGCT
CACTGCAACCTCCACCTCCCAGATTCAAGCGATTCTCCCACCTCAGCCTCTCAAGTAGCTGGAATTACAGACAGGCGCCAGCCACCACGCCCAGCAAATT
TTTGTATTTTTAGTAGAGATGGATTTTCACTATGTTGGCCAGGCTGGTCTCGAACTCCTTACCTCAAGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTG
GGATTACAAGTGTGAGCCACTACGCCTGGCCTAAAATCATGATAAGGTATGCCAAGTTATTGAAAATTATCTATGTTTCATGAATCAAGCCTTGCGTTTT
CTCACTGAACATTTCTGTGGCTTACTATGGCCC

Expression



Full and truncated open reading frames discovered in ENST00000498813

In silico ORF/peptide predictions
>peptide 1 (74 aa)
ASLLGLGLHPISGHFIAEHYMFLKGHETYSYYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLSWSFLDGCSGSHL


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT009782 (Evalue: 0)

Best hit to Swiss-Prot:
sp|Q5RE51|DEGS1_PONAB (Evalue: 4e-38)