Detailed information on ENST00000483032

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000498813 delta(4)-desaturase, sphingolipid 1 processed transcript ENST00000483032 526 293 noncoding Trans

Sequence

>ENST00000483032 (833 nt)
TCAAGGTCCTCCAAGGCTGTGCAGACTGCCTTCCCCAGGAGATCACCGAGCTCAAGACACAGATGTGGCAGCTCCTCAAGGGCCACGACCACCTGCAGGA<br />TGAGTTTTCTATCTTCTTTGACCACTTGCGCCCAGCAGCTAGCCGGATGGGTGACTTTGAAGAGATCAATTGGACTGAGGAAAAGGAGTATGAGGTATAG<br />GACCTAAGGCTGCTGTAGCCTTATGAAGGGGGAAGGCCACACGTGGGAGGGATATTGGCCTGGTGTCTGTGCTCAGCAGCACCAACTCCTTCTCAGTTTG<br />ATGGCTTTGAAGAAGTGGCCCTGCCTGATGTGGAAGAAGAGGAGGAGCCTCCCAAGATACCCACAGCCTCAAAGAACAAGAGGAAAAAAGAGATCGGGGT<br />CCAAAATCATGATAAGGTATTTTCTTTGTTTATTTGTTTGTTTTTGAGACAGAATCTCGCTCTGTCACCCAAACTAGAGTGCAGTGGCGTAATCTTGGCT<br />CACTGCAACCTCCACCTCCCAGATTCAAGCGATTCTCCCACCTCAGCCTCTCAAGTAGCTGGAATTACAGACAGGCGCCAGCCACCACGCCCAGCAAATT<br />TTTGTATTTTTAGTAGAGATGGATTTTCACTATGTTGGCCAGGCTGGTCTCGAACTCCTTACCTCAAGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTG<br />GGATTACAAGTGTGAGCCACTACGCCTGGCCTAAAATCATGATAAGGTATGCCAAGTTATTGAAAATTATCTATGTTTCATGAATCAAGCCTTGCGTTTT<br />CTCACTGAACATTTCTGTGGCTTACTATGGCCC

Expression



Full and truncated open reading frames discovered in ENST00000483032

In silico ORF/peptide predictions
>peptide 1 (74 aa)
MKGEGHTWEGYWPGVCAQQHQLLLSLMALKKWPCLMWKKRRSLPRYPQPQRTRGKKRSGSKIMIRYFLCLFVCF

>peptide 2 (68 aa)
SRSSKAVQTAFPRRSPSSRHRCGSSSRATTTCRMSFLSSLTTCAQQLAGWVTLKRSIGLRKRSMRYRT

>peptide 3 (65 aa)
KVLQGCADCLPQEITELKTQMWQLLKGHDHLQDEFSIFFDHLRPAASRMGDFEEINWTEEKEYEV

>peptide 4 (54 aa)
MDFHYVGQAGLELLTSSDPPASASQSAGITSVSHYAWPKIMIRYAKLLKIIYVS


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT006767 (Evalue: 0)

Best hit to Swiss-Prot:
sp|Q3T8J9|GON4L_HUMAN (Evalue: 1.0E-44)