Detailed information on ENST00000483456

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000581273 trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) nonsense mediated decay ENST00000483456 671 371 UTR3 Trans

Sequence

>ENST00000581273 (492 nt)
ATGGTCAACCCCACCGTGTACTTCCACATTGCCATTGACACGGAGCCCTTGGGCCGCGTCTCCTTCGAGCTGTTTGCAGACGAGGTTCCAAAGACAGCAG
AAAACTTTCGTGCTCTGAGCGCTGGAAAGAAAGGATTTGGGTGTGAGGGTTCCTGCTTTCACAGAATTATTACAGGGTTTATATGTCAGGGTGGTGACTT
CACATGCCATATGGCACTGGTGGCAAGTCCATCTACAGGTAGAAATTTGATGAGGAGAACTTCATCCTGAAGCATAGAGGTACTGGCATCTTGCCCATGG
CAAATGCTGGACCCAACACAAATGGTTCCCAGTTTTTCATGTGCCCTGCCAAGACTCAGTGGTTGGATGGCAAGCATGTGGTCTTTGGCATGGTGAAGGC
ATGAATATCATGGAGGCCATGGAACACTTTGGGTCCAGGAATGATAAGGCCAGCAAGAAGATCACCATTGCTGACTGTGGACAGCTCTACTAA

Expression



Full and truncated open reading frames discovered in ENST00000581273

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.