| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000389534 | zinc finger protein 841 | protein coding | ENST00000484171 | 557 | 269 | UTR3 | Trans | |
| ENST00000426391 | zinc finger protein 841 | protein coding | ENST00000484171 | 557 | 269 | UTR3 | Trans | |
| ENST00000482603 | glyoxylate reductase/hydroxypyruvate reductase | processed transcript | ENST00000484171 | 515 | 284 | noncoding | Trans | |
| ENST00000498813 | delta(4)-desaturase, sphingolipid 1 | processed transcript | ENST00000484171 | 554 | 281 | noncoding | Trans | |
| ENST00000513000 | inositol polyphosphate-4-phosphatase, type II, 105kDa | protein coding | ENST00000484171 | 514 | 263 | UTR3 | Trans | |
| ENST00000560870 | sense_intronic | sense intronic | ENST00000484171 | 533 | 262 | noncoding | Trans | |
| ENST00000594295 | zinc finger protein 841 | protein coding | ENST00000484171 | 557 | 269 | UTR3 | Trans | |
| TCONS_00011355 | 5-methyltetrahydrofolate-homocysteine methyltransferase | novel protein coding | ENST00000484171 | 613 | 283 | UTR5 | Trans | |
| TCONS_00011358 | 5-methyltetrahydrofolate-homocysteine methyltransferase | novel protein coding | ENST00000484171 | 613 | 283 | UTR5 | Trans | |
| TCONS_00135644 | zinc finger protein 841 | novel protein coding | ENST00000484171 | 557 | 269 | UTR3 | Trans | |
| TCONS_00204911 | erythrocyte membrane protein band 4.1 like 4A | novel noncoding | ENST00000484171 | 608 | 282 | noncoding | Trans | |
| TCONS_00204916 | erythrocyte membrane protein band 4.1 like 4A | novel protein coding | ENST00000484171 | 608 | 282 | UTR3 | Trans | |
| TCONS_00252827 | discs, large homolog 3 (Drosophila) | novel protein coding | ENST00000484171 | 629 | 280 | UTR5 | Trans |
>TCONS_00252827 (1207 nt)
GGGGTAGTGGCAAGGTGGCCAGAGCAATTGACTGGGAGCTGGGAACAGGAATGAAGAGGAAGAGCTGATAAGAAACATGCCCAGAGCAGATTTGATGCTA
CTGCCAATGTACCTGAATAAGAAGACAACTCTTTCTGGAAAAAGGGAAAACTTGAAGGGCTATTGAAGGCCGCTAGAAAGATGGAGTTTCACTCTTGTCG
CCCAGGATGGAGTACAATGGCATGATCTTGGCTCACTGCAACCTCTGCTTCCAGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGGTGGGCTTA
TAGGTGCCCGCCATGATGCCCAGCTAATTTTTGTTTCATTAGTACAAATAGGGTTTCACTATGTCGGCCAGGCTTGTCTCGAATTCCTGACCTCAGGTGA
TCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAACCACCGTGCCCGGTTTGAGTAACCTTTAAGTAAGAAAGTGCCTTTTGGGTTGAGT
TTAACAATTTCCATGGTAGAGAGTCTCTTCTGCTATATGCTGTTTACTTAGCTTCTGCCTAGTATATGCAGCAGCAGAAAATGGTTTCCCTTGTTGTAGG
TCTAATGAGATTTAGAACACTTTGGGTCCTCAGATATAGTGAGCAAGATTTTCACTTCATAGATGAAGGAACTGCAGCCTAAAGAATTGGGAAGAAAAGG
TTTATCCAGGCTTGCTGTGCATTCCTTCCTTTCTCTGGGAATTCCCTTGGAGAAGAAATCTGGCTGATCAAATCTCCTTGTAAACATGCTGTGAAGACTC
TGGGGAAAACCACTAATGATATTTGTTAGTGGCAGTCTTTATCTTTGAGAGACTTTTAGCAGCATGAACCTTACCCCCGTAGTAGAATTGTATATGGTAA
ACAAACCTGGAATCTAAGGATTCATGGGTAATGGCTTCTTGAAAAGTGTCAAGTAAGCTATGTAACTATGGCAGGAGATGGAACTACTTCAGGGTTAAAA
AAGCTGGCTTTCATTTCGTGCAAGTAATGTACTTGTGTACATCTTTTGGAGAACCATATGTTAAATCCGAATCAGACCAAGTCCTAATGTGGTAAGAAAA
GGGCTGTGGAGTAGTATTGGCAGTCCTGGGCTTTTCCCTATGTTCCCTGTACCTTGTGATTACTTATAGCTTTGACATTATTAGTAAAGTTTGATACTTG
GTAAAATA
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.