| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000290219 | interferon gamma receptor 2 (interferon gamma transducer 1) | protein coding | ENST00000484377 | 936 | 319 | CDS | Cis | |
| ENST00000381995 | interferon gamma receptor 2 (interferon gamma transducer 1) | protein coding | ENST00000484377 | 936 | 319 | CDS | Cis | |
| ENST00000405436 | interferon gamma receptor 2 (interferon gamma transducer 1) | protein coding | ENST00000484377 | 936 | 319 | CDS | Cis | |
| ENST00000421802 | interferon gamma receptor 2 (interferon gamma transducer 1) | protein coding | ENST00000484377 | 936 | 319 | CDS | Cis | |
| ENST00000545369 | interferon gamma receptor 2 (interferon gamma transducer 1) | nonsense mediated decay | ENST00000484377 | 936 | 319 | UTR3 | Cis | |
| TCONS_00161618 | interferon gamma receptor 2 (interferon gamma transducer 1) | novel protein coding | ENST00000484377 | 936 | 319 | CDS | Cis |
>TCONS_00161618 (694 nt)
AATGGTGGCTGTTTTTTTCTATTTCTGACTCTGCCATGAATTTTTTTTTTTTTTTTTAAAGACAATATCTCACTCTGTTGCCTAGGCTGGAGTGCAGTGG
TGCAACCACAGCTCACTGCACCTTCAAATGCTGGAGCTCAGGCAATCCTCTTACCTCCGCTTTCCAAGCAGCTGGGACCACAGATGTATCCTCCACTCCT
CGCTGGCCACCATCCTGCTGCCCAACAGAAGAAGCTCTTCTGTCTCCGATTTCCTGAACGGTCTAAGGGAGCCAGTGGGCTAGGCCCATGCTTTGGTTCA
AAGCGTTTGGAGAACATCTTCTTGCTCCTTTTCCGGAAACGAGATAATGGACACAGAGTCCCAGACGTCATCCTTTGGACCAGGAAGAAACAGGCTCCTG
CCAGCACCGACAGCAACGAAAATGTTCCCACGGAGATCAGGATGACTTGCTGAAGCTCAGTGGAGGCTAAAAAGAGGACACGAAAGTGAACAGAATGATC
TTCCTACGCACAACACAAACATCAGTTAATGTTCCATCCATGCTGCTTAAAGAGCATTCCTGTCCTAGTAAAATGGGCAAGTCCCTCTACCCCCCACCCT
CACCTGGTATGCTTACATTAATAGCTAAAGTCAATCCTGTAATGAAATAAAGCAAGTGGTAGCTGTCTGGTAGCCTCCACTACTGCAAATCTCAG
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.