Potential function |
Interacting transcript |
Gene description |
Transcript biotype |
lncRNA id |
Alignment score (LAST) |
Alignment length |
Transcript region involved in interaction |
Genomic orientation of interacting RNAs |
|
ENST00000242057 |
aryl hydrocarbon receptor |
protein coding |
ENST00000484380 |
544 |
295 |
UTR3 |
Trans |
|
ENST00000257189 |
desmoglein 3 |
protein coding |
ENST00000484380 |
582 |
312 |
UTR3 |
Trans |
|
ENST00000309060 |
zinc fingers and homeoboxes 3 |
protein coding |
ENST00000484380 |
612 |
298 |
UTR3 |
Trans |
|
ENST00000338983 |
Mitogen-activated protein kinase kinase kinase MLT |
protein coding |
ENST00000484380 |
579 |
309 |
UTR3 |
Trans |
|
ENST00000379565 |
ribosomal protein S6 kinase, 90kDa, polypeptide 3 |
protein coding |
ENST00000484380 |
666 |
308 |
UTR3 |
Trans |
|
ENST00000389534 |
zinc finger protein 841 |
protein coding |
ENST00000484380 |
546 |
268 |
UTR3 |
Trans |
|
ENST00000421422 |
zinc fingers and homeoboxes 3 |
protein coding |
ENST00000484380 |
612 |
298 |
UTR3 |
Trans |
|
ENST00000424496 |
sense_intronic |
sense intronic |
ENST00000484380 |
623 |
283 |
noncoding |
Trans |
|
ENST00000426391 |
zinc finger protein 841 |
protein coding |
ENST00000484380 |
546 |
268 |
UTR3 |
Trans |
|
ENST00000463496 |
aryl hydrocarbon receptor |
nonsense mediated decay |
ENST00000484380 |
544 |
295 |
UTR3 |
Trans |
|
ENST00000463899 |
N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase) |
processed transcript |
ENST00000484380 |
505 |
295 |
noncoding |
Trans |
|
ENST00000482603 |
glyoxylate reductase/hydroxypyruvate reductase |
processed transcript |
ENST00000484380 |
590 |
279 |
noncoding |
Trans |
|
ENST00000498813 |
delta(4)-desaturase, sphingolipid 1 |
processed transcript |
ENST00000484380 |
571 |
301 |
noncoding |
Trans |
|
ENST00000543196 |
polypeptide N-acetylgalactosaminyltransferase 6 |
protein coding |
ENST00000484380 |
517 |
306 |
UTR3 |
Trans |
|
ENST00000594295 |
zinc finger protein 841 |
protein coding |
ENST00000484380 |
546 |
268 |
UTR3 |
Trans |
|
ENST00000607772 |
CNKSR family member 3 |
protein coding |
ENST00000484380 |
602 |
313 |
UTR3 |
Trans |
|
ENST00000607772 |
CNKSR family member 3 |
protein coding |
ENST00000484380 |
566 |
304 |
UTR3 |
Trans |
|
ENST00000620139 |
melanoregulin |
protein coding |
ENST00000484380 |
669 |
321 |
UTR3 |
Trans |
|
TCONS_00000720 |
lincRNA |
novel protein coding |
ENST00000484380 |
509 |
309 |
UTR3 |
Trans |
|
TCONS_00001594 |
lincRNA |
novel protein coding |
ENST00000484380 |
612 |
307 |
UTR5 |
Trans |
|
TCONS_00004719 |
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 |
novel protein coding |
ENST00000484380 |
621 |
302 |
UTR3 |
Trans |
|
TCONS_00004721 |
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 |
novel protein coding |
ENST00000484380 |
621 |
302 |
UTR3 |
Trans |
|
TCONS_00030130 |
calcium/calmodulin-dependent protein kinase II gamma |
novel protein coding |
ENST00000484380 |
659 |
307 |
UTR3 |
Trans |
|
TCONS_00050741 |
spermatogenesis associated, serine-rich 2 |
novel protein coding |
ENST00000484380 |
604 |
299 |
UTR3 |
Trans |
|
TCONS_00050741 |
spermatogenesis associated, serine-rich 2 |
novel protein coding |
ENST00000484380 |
615 |
300 |
UTR3 |
Trans |
|
TCONS_00050741 |
spermatogenesis associated, serine-rich 2 |
novel protein coding |
ENST00000484380 |
671 |
306 |
UTR3 |
Trans |
|
TCONS_00065093 |
UBA domain containing 2 |
novel protein coding |
ENST00000484380 |
606 |
302 |
UTR5 |
Trans |
|
TCONS_00065094 |
UBA domain containing 2 |
novel protein coding |
ENST00000484380 |
606 |
302 |
UTR5 |
Trans |
|
TCONS_00067572 |
DCN1, defective in cullin neddylation 1, domain containing 2 |
novel protein coding |
ENST00000484380 |
614 |
300 |
UTR3 |
Trans |
|
TCONS_00076763 |
protein phosphatase 1, regulatory subunit 13B |
novel protein coding |
ENST00000484380 |
630 |
295 |
UTR3 |
Trans |
|
TCONS_00095053 |
epithelial membrane protein 2 |
novel protein coding |
ENST00000484380 |
530 |
285 |
UTR3 |
Trans |
|
TCONS_00098643 |
fatty acid 2-hydroxylase |
novel protein coding |
ENST00000484380 |
604 |
288 |
UTR5 |
Trans |
|
TCONS_00098644 |
fatty acid 2-hydroxylase |
novel protein coding |
ENST00000484380 |
604 |
288 |
UTR3 |
Trans |
|
TCONS_00098645 |
fatty acid 2-hydroxylase |
novel protein coding |
ENST00000484380 |
604 |
288 |
UTR3 |
Trans |
|
TCONS_00098647 |
fatty acid 2-hydroxylase |
novel protein coding |
ENST00000484380 |
604 |
288 |
UTR3 |
Trans |
|
TCONS_00104960 |
A kinase (PRKA) anchor protein 1 |
novel protein coding |
ENST00000484380 |
598 |
304 |
UTR3 |
Trans |
|
TCONS_00116668 |
desmoglein 3 |
novel protein coding |
ENST00000484380 |
582 |
312 |
UTR3 |
Trans |
|
TCONS_00116668 |
desmoglein 3 |
novel protein coding |
ENST00000484380 |
616 |
301 |
UTR3 |
Trans |
|
TCONS_00116669 |
desmoglein 3 |
novel protein coding |
ENST00000484380 |
582 |
312 |
UTR3 |
Trans |
|
TCONS_00124891 |
zinc finger protein 540 |
novel protein coding |
ENST00000484380 |
614 |
309 |
UTR5 |
Trans |
|
TCONS_00125901 |
zinc finger protein 226 |
novel protein coding |
ENST00000484380 |
553 |
304 |
UTR3 |
Trans |
|
TCONS_00125904 |
zinc finger protein 226 |
novel protein coding |
ENST00000484380 |
553 |
304 |
UTR3 |
Trans |
|
TCONS_00135644 |
zinc finger protein 841 |
novel protein coding |
ENST00000484380 |
546 |
268 |
UTR3 |
Trans |
|
TCONS_00141670 |
Rho guanine nucleotide exchange factor (GEF) 4 |
novel protein coding |
ENST00000484380 |
615 |
300 |
UTR5 |
Trans |
|
TCONS_00141673 |
Rho guanine nucleotide exchange factor (GEF) 4 |
novel protein coding |
ENST00000484380 |
615 |
300 |
UTR5 |
Trans |
|
TCONS_00141679 |
Rho guanine nucleotide exchange factor (GEF) 4 |
novel protein coding |
ENST00000484380 |
615 |
300 |
UTR5 |
Trans |
|
TCONS_00147093 |
ATPase family, AAA domain containing 2B |
novel protein coding |
ENST00000484380 |
604 |
300 |
UTR3 |
Trans |
|
TCONS_00147100 |
ATPase family, AAA domain containing 2B |
novel protein coding |
ENST00000484380 |
671 |
309 |
UTR3 |
Trans |
|
TCONS_00147113 |
ATPase family, AAA domain containing 2B |
novel protein coding |
ENST00000484380 |
671 |
309 |
UTR3 |
Trans |
|
TCONS_00147113 |
ATPase family, AAA domain containing 2B |
novel protein coding |
ENST00000484380 |
604 |
300 |
UTR5 |
Trans |
|
TCONS_00147115 |
ATPase family, AAA domain containing 2B |
novel protein coding |
ENST00000484380 |
671 |
309 |
UTR3 |
Trans |
|
TCONS_00148048 |
potassium voltage-gated channel, subfamily G, member 3 |
novel protein coding |
ENST00000484380 |
637 |
294 |
UTR3 |
Trans |
|
TCONS_00149280 |
Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000416453} |
novel protein coding |
ENST00000484380 |
653 |
299 |
UTR3 |
Trans |
|
TCONS_00150696 |
septin 10 |
novel protein coding |
ENST00000484380 |
613 |
304 |
UTR3 |
Trans |
|
TCONS_00161482 |
BTB and CNC homology 1, basic leucine zipper transcription factor 1 |
novel protein coding |
ENST00000484380 |
654 |
308 |
UTR3 |
Trans |
|
TCONS_00163095 |
T-cell lymphoma invasion and metastasis 1 |
novel protein coding |
ENST00000484380 |
550 |
301 |
UTR3 |
Trans |
|
TCONS_00165085 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
ENST00000484380 |
610 |
296 |
UTR3 |
Trans |
|
TCONS_00165089 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
ENST00000484380 |
610 |
296 |
UTR3 |
Trans |
|
TCONS_00165090 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
ENST00000484380 |
610 |
296 |
UTR3 |
Trans |
|
TCONS_00165341 |
TTC28 antisense RNA 1 |
novel protein coding |
ENST00000484380 |
610 |
297 |
UTR5 |
Trans |
|
TCONS_00165341 |
TTC28 antisense RNA 1 |
novel protein coding |
ENST00000484380 |
607 |
305 |
UTR5 |
Trans |
|
TCONS_00166381 |
GRB2-related adaptor protein 2 |
novel protein coding |
ENST00000484380 |
646 |
309 |
UTR3 |
Trans |
|
TCONS_00171146 |
F-box and leucine-rich repeat protein 2 |
novel noncoding |
ENST00000484380 |
617 |
315 |
noncoding |
Trans |
|
TCONS_00174266 |
GRAM domain containing 1C |
novel protein coding |
ENST00000484380 |
610 |
304 |
UTR5 |
Trans |
|
TCONS_00175015 |
copine IV |
novel protein coding |
ENST00000484380 |
629 |
307 |
UTR3 |
Trans |
|
TCONS_00186316 |
KIAA0232 |
novel protein coding |
ENST00000484380 |
632 |
296 |
UTR3 |
Trans |
|
TCONS_00190999 |
zinc finger protein 721 |
novel protein coding |
ENST00000484380 |
616 |
305 |
UTR5 |
Trans |
|
TCONS_00190999 |
zinc finger protein 721 |
novel protein coding |
ENST00000484380 |
634 |
299 |
UTR5 |
Trans |
|
TCONS_00190999 |
zinc finger protein 721 |
novel protein coding |
ENST00000484380 |
624 |
299 |
UTR3 |
Trans |
|
TCONS_00194652 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000484380 |
620 |
299 |
UTR5 |
Trans |
|
TCONS_00194655 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000484380 |
620 |
299 |
UTR5 |
Trans |
|
TCONS_00194686 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000484380 |
606 |
305 |
UTR5 |
Trans |
|
TCONS_00196475 |
F-box and leucine-rich repeat protein 7 |
novel protein coding |
ENST00000484380 |
607 |
298 |
UTR3 |
Trans |
|
TCONS_00204911 |
erythrocyte membrane protein band 4.1 like 4A |
novel noncoding |
ENST00000484380 |
604 |
293 |
noncoding |
Trans |
|
TCONS_00210928 |
leucine rich repeat containing 1 |
novel protein coding |
ENST00000484380 |
644 |
309 |
UTR3 |
Trans |
|
TCONS_00213191 |
tubby like protein 4 |
novel protein coding |
ENST00000484380 |
630 |
304 |
UTR5 |
Trans |
|
TCONS_00219453 |
WD repeat domain 27 |
novel protein coding |
ENST00000484380 |
602 |
287 |
UTR3 |
Trans |
|
TCONS_00220258 |
aryl hydrocarbon receptor |
novel protein coding |
ENST00000484380 |
544 |
295 |
UTR3 |
Trans |
|
TCONS_00222403 |
protein tyrosine phosphatase, non-receptor type 12 |
novel protein coding |
ENST00000484380 |
603 |
295 |
UTR5 |
Trans |
|
TCONS_00226586 |
diacylglycerol kinase, beta 90kDa |
novel protein coding |
ENST00000484380 |
568 |
298 |
UTR3 |
Trans |
|
TCONS_00226588 |
diacylglycerol kinase, beta 90kDa |
novel protein coding |
ENST00000484380 |
568 |
298 |
UTR3 |
Trans |
|
TCONS_00235281 |
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 |
novel protein coding |
ENST00000484380 |
650 |
311 |
UTR5 |
Trans |
|
TCONS_00235708 |
oxidation resistance 1 |
novel protein coding |
ENST00000484380 |
607 |
300 |
UTR3 |
Trans |
|
TCONS_00240688 |
metastasis suppressor 1 |
novel protein coding |
ENST00000484380 |
549 |
301 |
UTR3 |
Trans |
|
TCONS_00242952 |
ankyrin repeat domain 20 family, member A2 |
novel protein coding |
ENST00000484380 |
529 |
311 |
UTR3 |
Trans |
|
TCONS_00242953 |
ankyrin repeat domain 20 family, member A2 |
novel protein coding |
ENST00000484380 |
529 |
311 |
UTR3 |
Trans |
|
TCONS_00247297 |
family with sequence similarity 166, member B |
novel protein coding |
ENST00000484380 |
627 |
304 |
UTR5 |
Trans |
|
TCONS_00252827 |
discs, large homolog 3 (Drosophila) |
novel protein coding |
ENST00000484380 |
633 |
306 |
UTR5 |
Trans |