Detailed information on ENST00000485119

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00168219 THO complex 5 novel protein coding ENST00000485119 503 271 UTR3 Trans
TCONS_00168220 THO complex 5 novel protein coding ENST00000485119 503 271 UTR3 Trans

Sequence

>ENST00000485119 (965 nt)
AATACAGTTTCCAAATATGAGACTGTTTTTACTATAAAAATACAACTGGCCAGGTGCAGTGGCTCACGCCTAAAATCCCAGCTCTTTGGATGGCCAAGGC<br />AGGCGGATCACTTGAAGTCAGGAGTTTGAGACCAGCCTGGCCAACAGGGTGAAATCTTCTCTACTAAAAATACAAAAATTAGCCAGGTGTGGTGATGGAT<br />TCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAAGTTTCAGTGAGCTGAGATCGTGCCACTGCAATCCAGC<br />CTGGGTGACAGAGCAAGACTTTGTCTCAAAAAAAACAAACAAACAAACAAACAAAAAACAAACTACAACTTCCTTACAAGACATAATGACTTCTTTTCTC<br />CATAAATGTCTCTAGTATTAGTTACATGATTGTATAATCTTCTACCTTATTTTAACTTGTCATAGCTATATATCTGTGAAGAAAATAGAAGAGCTAATGA<br />ATATGATTTCAAGAAAGCTTTGGACTTGTTGGAATATATTGATGAGGAAGAAGATATAAATATAAATGATCTAAAACTGGAAATCCTTTGCAAAGCTCTT<br />CAGAGAGATAAGTAAGTGCTCGTGGCATTGCTTCTTTGGAAAGTATAGAAACTGCTTTTCCTCTGCTCTCACCACATGACAGTCAATAACAGAAGACTTC<br />TGTGACCAGACGTGTTGGGATTTCCCACCTCCTACACTGGGCAACCAGTGAGTTCTGTTGGTGGGCACCAGCTGAATGTCCTTTAATTTAGTTCAGTCCT<br />GATACAATCTACAACCACAGGTTGAGGGCTCAGACTGCCCCTGACTTTGATGCCAATTTAAGCACCAGGGGGTTTTGCCTGTGTTCCTCACCGACCAGCT<br />ATAAATTGGGGTTCCCACAACCCCCTCCTTGGGTTTGATTAATTTGCTAGAGCAGCTCATAGAAC

Expression



Full and truncated open reading frames discovered in ENST00000485119

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT010085 (Evalue: 0)

Best hit to Swiss-Prot:
sp|Q6UX73|CP089_HUMAN (Evalue: 1.0E-12)