Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
---|---|---|---|---|---|---|---|---|
ENST00000382142 | myotubularin related protein 12 | protein coding | ENST00000485387 | 606 | 287 | UTR3 | Trans | |
ENST00000399322 | diacylglycerol kinase, beta 90kDa | protein coding | ENST00000485387 | 530 | 300 | UTR3 | Trans | |
ENST00000439138 | transmembrane protein 98 | protein coding | ENST00000485387 | 544 | 289 | UTR5 | Trans | |
ENST00000560870 | sense_intronic | sense intronic | ENST00000485387 | 534 | 268 | noncoding | Trans | |
ENST00000620139 | melanoregulin | protein coding | ENST00000485387 | 610 | 302 | UTR3 | Trans | |
TCONS_00009834 | SRY (sex determining region Y)-box 13 | novel protein coding | ENST00000485387 | 604 | 289 | UTR3 | Trans | |
TCONS_00116668 | desmoglein 3 | novel protein coding | ENST00000485387 | 587 | 293 | UTR3 | Trans | |
TCONS_00119478 | zinc finger and BTB domain containing 7C | novel protein coding | ENST00000485387 | 604 | 290 | UTR5 | Trans | |
TCONS_00140732 | NCK adaptor protein 2 | novel protein coding | ENST00000485387 | 612 | 301 | UTR3 | Trans | |
TCONS_00141667 | Rho guanine nucleotide exchange factor (GEF) 4 | novel protein coding | ENST00000485387 | 529 | 301 | UTR3 | Trans | |
TCONS_00141670 | Rho guanine nucleotide exchange factor (GEF) 4 | novel protein coding | ENST00000485387 | 529 | 301 | UTR3 | Trans | |
TCONS_00141673 | Rho guanine nucleotide exchange factor (GEF) 4 | novel protein coding | ENST00000485387 | 529 | 301 | UTR3 | Trans | |
TCONS_00141679 | Rho guanine nucleotide exchange factor (GEF) 4 | novel protein coding | ENST00000485387 | 529 | 301 | UTR3 | Trans | |
TCONS_00141681 | Rho guanine nucleotide exchange factor (GEF) 4 | novel protein coding | ENST00000485387 | 529 | 301 | UTR3 | Trans | |
TCONS_00148048 | potassium voltage-gated channel, subfamily G, member 3 | novel protein coding | ENST00000485387 | 586 | 302 | UTR3 | Trans | |
TCONS_00150696 | septin 10 | novel protein coding | ENST00000485387 | 600 | 295 | UTR3 | Trans | |
TCONS_00194652 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | ENST00000485387 | 644 | 294 | UTR5 | Trans | |
TCONS_00194655 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | ENST00000485387 | 644 | 294 | UTR5 | Trans | |
TCONS_00202828 | myotubularin related protein 12 | novel protein coding | ENST00000485387 | 606 | 287 | UTR3 | Trans | |
TCONS_00204911 | erythrocyte membrane protein band 4.1 like 4A | novel noncoding | ENST00000485387 | 604 | 303 | noncoding | Trans | |
TCONS_00204916 | erythrocyte membrane protein band 4.1 like 4A | novel protein coding | ENST00000485387 | 604 | 303 | UTR3 | Trans | |
TCONS_00213738 | enoyl-CoA delta isomerase 2 | novel protein coding | ENST00000485387 | 611 | 298 | UTR3 | Trans | |
TCONS_00226586 | diacylglycerol kinase, beta 90kDa | novel protein coding | ENST00000485387 | 536 | 320 | UTR3 | Trans | |
TCONS_00226588 | diacylglycerol kinase, beta 90kDa | novel protein coding | ENST00000485387 | 536 | 320 | UTR3 | Trans | |
TCONS_00240685 | metastasis suppressor 1 | novel protein coding | ENST00000485387 | 501 | 239 | UTR3 | Trans | |
TCONS_00252827 | discs, large homolog 3 (Drosophila) | novel protein coding | ENST00000485387 | 610 | 298 | UTR5 | Trans |
>TCONS_00252827 (2897 nt)
CAAAGTGCTGAGATAACAGGCATGAGCCACTGCGCCTGGCAAGGTCATGCTTTTTGATGCTGGGTAGTTCTTTGACTCCTGACCTGGCCACTTGTTAGCT
ATGTGAACTTTGGACACATTTCTTAATCTCTGAATGTTGGTAAATTGGGGATGATGATACTGTCCCATACAGCTGTTGTAAGGGTTAAATGGTTCAAGTG
TTGCAAAGAGCTGAGCACGTGCCTGGCTCATAGTAAGTGTCCAACAAGTGATAGCTACTGGGGCTGCTGCTGTTATTATTATGCTTAACAGGTGGTTAAT
GAATAAAGAGATATATTATGCAAAATTATCAGAATCTGGCAAACAGCTGATAAGGCAATGAGGAAAGAGGTTTTTTGTTTTTTGTTTTTGAGACAGGGTC
TCTCTCTGTTGCCCAGGCTGGAATGCAATGGCGCGATCTCAGCTCGCTGCAACCTCCACCTCCCGGGTTCAAGCGATTCTTGTGCCTCAGCCTCCCGCGT
AGCTGGGATTACAGGCATGTGCCACCACACCCTGCTAATTTTTGTATTTTTAGTAGAGACATGGTTTCACCACGTTGGTCAGGCTGGTCTCGAACTCCTG
ACCTGAAGTGATGAGCCCACCTCAGCCTCCCAAAGTGCTGGGATTGCAGGGGTGAGCCACTATGTCCAGCCGAGGAAAGAGGTTTAAAATAACTTCTAGG
TTTCTGGTTTGGATGTCTGCATAGACGGTTCCATTTGCGTAGAGAGAATCTGCAGGAGAAGCAGACTTGGATGGGAATTTTTTTTTTTTTTTGAGTTGCA
GTGTCCACAGGGCCAGTGGGTGATTTCTTTTTTCCTTCTTTCTTTTTTTTTTTTTTTGGAGACAGTCTTGCTTTGTCACTCAGGCTGGAGTGGTGGCGCG
ATCACGGCTTGCTGCACACTGCAGCCTCAACCTCCCGGGCCCATGTAGTCCTCCCACCGCAGCCTCCCAAGTAACTGGGACTACAGGCATGTGCAACCAC
GCCTGGCTTATTTTTTAATTTTTTGTAGAGATGGGGTTTGGCTATGCTGCCCAGGCTGGTTTCTAACTCCTGGCATCAAGCGATCCTTTGGCCTCCCAAA
GTGCTGAGATTACAGGCGTGCGCCACCACACCCGGCCTCACCAGGCGCTGGCTGCATGGCCAGTTCTGGAGCCCGGGAGCAGGTTCTGTGTTGAGGGAGT
CACTCTGGGAGTCATTTGCTTGTGGGTGATCATCAGAGCCCTTTGTTTGGAGTCAAAATCCCAGGAAGAGTGCATAGACTGAGCAGAGAAGAGGGCCAGC
CACCTCCATAGAGGCAGGGAGAGCAGCCGAGCTGGAGCCGGAGGATTCCTGGACATGGAGAAGGCCTGCAGTTTTGTCAAGGAAGCAAGCAAAGGGTCTC
TTTCTACTCGATGAAGGTAGTCGGCACCGCCACAGGGTGGACAGGGCTCAGGTCCAAGGAGGAGGAGGAAGGCACACTGGAGCCGCTCTGGGGCCCAGAG
CGTGGGTGGGTGGTCCCCCAGGATGACCAGGCAGGTGTCAGATTTTGGGGTTCAAGGAGAGGATGGGAGGTGAAAAAGTGACACATCACGTGAGTTGCTG
TGAAGGAGAAGGAGCTGTGAAGCCGAGTAGACACATGAGCGTCGCCAGCTCTTTGATGGAAAGTGCCGGTTGAGGAGGAGGGGTTGAAGATGGGAGAGGG
AGGGAATGGGCTGGAGGTGAAGGCTCGGGGTCAGTGGTGGGACTTGGGGCGCTCCAGGGCAGGGGTGTGCCCACTTGGCATCACGTTTGTGGGTAGGTGG
CCTGGAAGATGAGCGTATCCAAGCATGGGTGGCCCCTGGTTCCTTTGAGGTAGGAGGTGAGATGCTGAGTGTGAGGGCCATGTGTATTGAGGGCCCAGGA
CAGCCTGGAAGCCCCAGGGCGCTGTGACCTCCCCAGTCAGCAGTGAGCTGTCTCCAGGCCGGGGCTCACTGGCTGGGACTGGGATTGAGAGGAAGGCGGA
GAAAACAGGCAGGAGAAACTGAAAGGGTCTCAGCTGGCGGGACAGGAAGTGTGGGCCCAGGGCTTGGCCCGGGAGGAGACAAGGGGACCAAGGGCTTGGC
AATGGGGATGAGATCAGAGAGCTGCAGCTTCCACCCCGGGTGCCTTCCTCGCCCTGCCCAGAGCGGCGGCCACACTGCTCTTTCTTGGAAGCCCTGTAAC
TTTGCGTGCCCTGCTCCATCCAGTTCGCTCCCAGGACCCCGGGCAGCGGCGGGTGCTGGACCGGGCTGCCCGGCAGCGTCGCATCAACCGGCAGCTGGAG
GCCCTGGAGAATGACAACTTCCAGGATGACCCCCACGCGGGACTCCCTCAGCTCGGCAAGAGACTGCCTCAGTTTGATGACGATGCGGACACTGGAAAGA
AAAAGAAGAAAACCCGAGGTGATCATTTTAAACTTCGCTTCCGAAAAAACTTTCAGGCCCTGTTGGAGGAGCAGAACTTGAGTGTGGCCGAGGGCCCTAA
CTACCTGACGGCCTGTGCGGGACCCCCATCGCGGCCCCAGCGCCCCTTCTGTGCTGTCTGTGGCTTCCCATCCCCCTACACCTGTGTCAGCTGCGGTGCC
CGGTACTGCACTGTGCGCTGTCTGGGGACCCACCAGGAGACCAGGTGTCTGAAGTGGACTGTGTGAGCCTGGGCATTCCCAGAGAGGAAGGGCCGCTGTG
CACTGCCCGGCCTTCAGAAAGACAGAATTTCATCACCCAATGCAGGGGGAGCTCTTCCTGGACCAAGGGAGGAGCCGCTCATTCACCCAACAAAACTGTG
TCTTATCTGCCAGGAAAGACCAGCCTCACTCCTGGGAACTGTCTGGCAGGTAGGCTGGGCCCCCCAGTGCTGTTAGAATAAAAAGCCTCGTGCCGGAA
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.