Detailed information on ENST00000486841

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000375587 centromere protein P protein coding ENST00000486841 4412 1505 UTR3 Trans

Sequence

>ENST00000375587 (2346 nt)
CTTTACGTATGTCGACTCTGACAGTGTGGTGTGTGTTGAGCTGTCCCTGGTCAGTATGGACAGACCCACATAGCTTGGAGCATGTGTTGAAGAGTGTAAA
TGTCAGAGCCAGCGTACCGGGTTTGAGTCCCTGCCTTGCCATTGACAAGCAGGGCATGACAGACAAGTGATGTCTGTGTCTGTTGCTTGTCTGTAAAGTG
GGACGCCGGCCGTGCTGCCCTGTTGGGCTGCTGTGAGGGTGGAGCAAGTTAACACATGCACAGCCTGTAGAAGGGTGGCCGTCTGCCGTTGTCTCTGGTG
GCTGTATGATGTTCCGGAGGGAATGTCGTTCTAAGCGATGCCTTGCTGAACACCCCCTGCGCTCTCCTTGCAGGTGTCGAGTGATACTCACTTGATACTC
TGAGTGTGGCCAACATGCGGGGCTCAGGTGGCTTACTGCTTTTCCTTCCAAAGGCCGACTGTGGTGACCTTGCTGAAGACAGATCATCCGTCTCAGGGTC
TGGAGTCGGGGTCCCACACTGCTTGCCGTGAGAGGTCAGGGGGCGGTGCTGGCCTCTGAGCAGCCCCGTGGCACTGAGGGCTGGCCCAGGTGCTCTCACA
GGGCGACCTCCTGACGCCCGTGCTCACCGTGGCCCTCGCTCCTAATCCCACCCTCAGGTTCTGAGGCAGGAAGCAGTTCCCACACTTGGCTACTGGGAAG
GAAGGTTGTGTGGGGGGGCAGAGGCTTCCTGTGTGACCTGGAGCTGATCTTTCCCGCCCCTGCAGGTGCAGCAGTACCGCGTCGCCATGACTGCCAAGGA
CTGCTCCATCATGATTGCACTGTCTCCCTGTCTGCAGGATGCCAGCTCTGATCAAAGGCCTGTCGTCCCTTCATCGAGGTCCAGGTTTGCCTTTTCCGTG
TCTGTGCTGGACCTTGACCTCAAGCCCTACGAGAGCATTCCCCATCAGTATAAACTGGACGGCAAGATCGTCAACTATTATTCAAAGACTGTACGTGCCA
AAGACAACGCCGTGATGTCGACTCGGTTCAAGGAAAGCGAAGATTGCACATTAGTTCTCCACAAGGTCTAACTCTTTCCCTGCAGTGTCTTTGAAACTTG
AACATAATGTGAAGGCTGAATGATAGAGATATTTTCTGTTGTGTTGGGTGACCTTTGGTTGTGAATGTTTTTGCTTTTAACCCCTTTTGAGGTGGGATTG
CCTCTTGGAGACATGGAATTGAAGAGCACTAGAAACAACTTCCTGGACAAGGAATGTAGGAAGTGAGTGCTGTGTCCCAGGAAGCTGCTCACACTCTTAA
AATGGAAGTGTCCGTTAAGCCCTGGGAAGACGTTCTGGATAGTTCTTCTTTCCCAACCAGGGCTCATGTCTGATTCTCTAATGCGAAAAGCCTTATTCTA
AGACCCAAGGTTTGGATCTGCTACCACCAGACTCCTAACATAGAAAACTTGAATTGTCACATACATTTTACAGTTTGGACTTTTAAGAAAACATGGATAC
TACTGGAACTTCCCCCAGCTGAGTTACATGGTCACTTTTTCAGTGCAAGCCACATATCAACACAGGTTTTTAGGTGGTTCCCTGCTGCACAGCGTGACCT
CGTGGTCGCGCAGATGCCGATTCTGAGCAGTGTAGACTCAGGGTCCCTGTGGAGGTGCTGAAGCCCACAGTTCCACACAGGGCAGCAGGGAGCGCAAGGC
TCAGGTCAGGATGGACACCACTCATGCGAGCATTGACCTTTTTTTTTTTGCTTTACAATTTAATCTTTCACATGAGGGGGAGATGAGCTGTTCTTTCCCA
CTAAAAATTGCTGCTGTAGAAGTTGGAGGTGGAGCTGTGACTGGCTGAGCTGCTGTGGCCGGGCTGGGCAGTGTGCCCCAACAGCTCAGTGCTTTCCTGA
CACTCCAGTGTCTGGGGTGGTTGAGGAGCGAGTTCTCTCTTCCTCCCAGACCAAGTTCCTCCCTCGGGTTTGCCTTGAGACGTGTTGCGTTTTTGGGCCC
CGTGGCCTCTCCCTGTTAGGCTGCCACAGGCCCTGCTTCTGGAAGGTGAACAGCTCCTGGCTGCTGCCGAGAGGGTTCTCGTTGGGGTCACCAAAGTGTG
CCCGGCTGCTATGAAAAACGTTGGGAATCTTGGTTTCAGTTTTTTATTCTATGCTAGGTTGTACAGACTTATTTATATCATCGTTTTGAGGGACTAATGG
AGGCTTATTGTAACATATAATATTAGTGAAACCATGGAATTATATGAAAATGATACATGAGAAATAAGGAAACTATTTTGCTGATTGTAAATTTTTGTGG
GAAATTTTGTGATAACTTGAGAATTATACTTGTTTGAATCAAGGCAA

Expression



Full and truncated open reading frames discovered in ENST00000375587

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.