Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
---|---|---|---|---|---|---|---|---|
ENST00000617275 | pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 | protein coding | ENST00000486927 | 610 | 249 | UTR3 | Trans | |
TCONS_00210637 | polymerase (DNA directed), eta | novel protein coding | ENST00000486927 | 624 | 252 | UTR3 | Trans | |
TCONS_00213191 | tubby like protein 4 | novel protein coding | ENST00000486927 | 633 | 248 | UTR5 | Trans | |
TCONS_00233718 | pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 | novel protein coding | ENST00000486927 | 610 | 249 | UTR3 | Trans |
>TCONS_00233718 (552 nt)
ATTTCAAGTGGAAAATAGTATGTGAATCCTATAGGAAAAACAACTCTTTGTTTCCTGATTTAATAGTAATGAAGGAAGGAGATGAATGACGGAGTCTCGC
TCTGTCGCCCAGGCTGGGGTGCAGTGGCACGGTCTCGGCTCACTGCAAGCTCCGCCTCTTGGGTCCACGCCATTCTCCGGCCTCAGCCTCCTGAGTATCT
GGGACTACAGGCGCCTGCCACCGTGTCCGGCTTACTTTTTTTGTATTTTTAATAGAGACGGGGTTTCCCTGTGGTCTCGATCTCCTGACCTCGTGATCCG
CCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGAGAATTATGAAGATGATGACCTAGTAAATTCTGATGAGGTTATGAAGAAACCATGTCCAGTAC
AGATTGTTCTTGCTCATGAAGATGACCATAACTTTGAACTTGATGAAGAAGCTTTGGAGCAGATATTGCTACAGGAGCACATACGAGATCTTAACATAGT
AGTGGTATCTGTGGCAGGAGCTTTTCGTAAAGGGAAGTCATTTCTACTGGACT
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.