Detailed information on ENST00000486927

lncRNA-RNA interactions

Number of interactions: 4

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000617275 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 protein coding ENST00000486927 610 249 UTR3 Trans
TCONS_00210637 polymerase (DNA directed), eta novel protein coding ENST00000486927 624 252 UTR3 Trans
TCONS_00213191 tubby like protein 4 novel protein coding ENST00000486927 633 248 UTR5 Trans
TCONS_00233718 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 novel protein coding ENST00000486927 610 249 UTR3 Trans

Sequence

>TCONS_00233718 (552 nt)
ATTTCAAGTGGAAAATAGTATGTGAATCCTATAGGAAAAACAACTCTTTGTTTCCTGATTTAATAGTAATGAAGGAAGGAGATGAATGACGGAGTCTCGC
TCTGTCGCCCAGGCTGGGGTGCAGTGGCACGGTCTCGGCTCACTGCAAGCTCCGCCTCTTGGGTCCACGCCATTCTCCGGCCTCAGCCTCCTGAGTATCT
GGGACTACAGGCGCCTGCCACCGTGTCCGGCTTACTTTTTTTGTATTTTTAATAGAGACGGGGTTTCCCTGTGGTCTCGATCTCCTGACCTCGTGATCCG
CCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGAGAATTATGAAGATGATGACCTAGTAAATTCTGATGAGGTTATGAAGAAACCATGTCCAGTAC
AGATTGTTCTTGCTCATGAAGATGACCATAACTTTGAACTTGATGAAGAAGCTTTGGAGCAGATATTGCTACAGGAGCACATACGAGATCTTAACATAGT
AGTGGTATCTGTGGCAGGAGCTTTTCGTAAAGGGAAGTCATTTCTACTGGACT

Expression



Full and truncated open reading frames discovered in TCONS_00233718

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.