Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
---|---|---|---|---|---|---|---|---|
ENST00000227155 | CD82 molecule | protein coding | ENST00000487304 | 653 | 267 | UTR3 | Trans | |
ENST00000424496 | sense_intronic | sense intronic | ENST00000487304 | 575 | 266 | noncoding | Trans | |
ENST00000482603 | glyoxylate reductase/hydroxypyruvate reductase | processed transcript | ENST00000487304 | 549 | 269 | noncoding | Trans | |
ENST00000524750 | CD82 molecule | protein coding | ENST00000487304 | 550 | 231 | UTR3 | Trans | |
ENST00000607772 | CNKSR family member 3 | protein coding | ENST00000487304 | 602 | 270 | UTR3 | Trans | |
TCONS_00001594 | lincRNA | novel protein coding | ENST00000487304 | 662 | 263 | UTR5 | Trans | |
TCONS_00030130 | calcium/calmodulin-dependent protein kinase II gamma | novel protein coding | ENST00000487304 | 642 | 265 | UTR3 | Trans | |
TCONS_00034642 | CD82 molecule | novel protein coding | ENST00000487304 | 653 | 267 | UTR3 | Trans | |
TCONS_00034643 | CD82 molecule | novel protein coding | ENST00000487304 | 653 | 267 | UTR3 | Trans | |
TCONS_00039782 | GRAM domain containing 1B | novel protein coding | ENST00000487304 | 623 | 266 | UTR5 | Trans | |
TCONS_00041296 | RIC3 acetylcholine receptor chaperone | novel protein coding | ENST00000487304 | 635 | 266 | UTR3 | Trans | |
TCONS_00041298 | RIC3 acetylcholine receptor chaperone | novel protein coding | ENST00000487304 | 635 | 266 | UTR3 | Trans | |
TCONS_00108999 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000487304 | 638 | 266 | UTR5 | Trans | |
TCONS_00109000 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000487304 | 638 | 266 | UTR5 | Trans | |
TCONS_00109009 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000487304 | 638 | 266 | UTR5 | Trans | |
TCONS_00109011 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000487304 | 638 | 266 | UTR5 | Trans | |
TCONS_00109012 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000487304 | 638 | 266 | UTR5 | Trans | |
TCONS_00109013 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000487304 | 638 | 266 | UTR5 | Trans | |
TCONS_00109014 | trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) | novel protein coding | ENST00000487304 | 638 | 266 | UTR5 | Trans | |
TCONS_00116668 | desmoglein 3 | novel protein coding | ENST00000487304 | 588 | 256 | UTR3 | Trans | |
TCONS_00116668 | desmoglein 3 | novel protein coding | ENST00000487304 | 597 | 262 | UTR3 | Trans | |
TCONS_00133831 | carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) | novel protein coding | ENST00000487304 | 617 | 262 | UTR3 | Trans | |
TCONS_00141670 | Rho guanine nucleotide exchange factor (GEF) 4 | novel protein coding | ENST00000487304 | 632 | 266 | UTR5 | Trans | |
TCONS_00141673 | Rho guanine nucleotide exchange factor (GEF) 4 | novel protein coding | ENST00000487304 | 632 | 266 | UTR5 | Trans | |
TCONS_00141679 | Rho guanine nucleotide exchange factor (GEF) 4 | novel protein coding | ENST00000487304 | 632 | 266 | UTR5 | Trans | |
TCONS_00165085 | SPECC1L-ADORA2A readthrough (NMD candidate) | novel protein coding | ENST00000487304 | 618 | 266 | UTR3 | Trans | |
TCONS_00165089 | SPECC1L-ADORA2A readthrough (NMD candidate) | novel protein coding | ENST00000487304 | 618 | 266 | UTR3 | Trans | |
TCONS_00165090 | SPECC1L-ADORA2A readthrough (NMD candidate) | novel protein coding | ENST00000487304 | 618 | 266 | UTR3 | Trans | |
TCONS_00194682 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | ENST00000487304 | 610 | 266 | UTR3 | Trans | |
TCONS_00194686 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | ENST00000487304 | 630 | 261 | UTR3 | Trans | |
TCONS_00194686 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | ENST00000487304 | 610 | 266 | UTR3 | Trans |
>TCONS_00194686 (1961 nt)
CCCTTTCCTCAGCTGCCGCCAAGGTGCTCGGTCCTTCCGAGGAAGCTAAGGCTGCGTTGGGGTGAGGCCCTCACTTCATCCGGCGACTAGCACCGCGTCC
GGCAGCGCCAGCCCTACACTCGCCCGCGCCATGGCCTCTGTCTCCGAGCTCGCCTGCATCTACTCGGCCCTCATTCTGCACGACGATGAGGTGACAGTCA
CGGAGGATAAGATCAATGCCCTCATTAAAGCAGCCGGTGTAAATGTTGAGCCTTTTTGGCCTGGCTTGTTTGCAAAGGTAAGGTGATGGTGGCAAAGTGA
TTGTGGTAAGGCCTGCTGATTTACGAGGGCAGTTGTACATGCTAAAGTACCCCCAGCGGTGCCATAACGCCCCACATGCCGCTGGATCTCCTAGGTGTTT
TTCGTTGCATGTATATCTCTAGGAGCTAATAAGATTTCAGCTTGTCAAGTCTTACGTTTCCTTATCAGACTCTGGTTTCCCTTTTGCTCTGAAACCATGG
TTAAAAAAAATGTGAATCAGGTCATTTATTCCCAAAAAGGGTCACTCGGGAGATAGGTACTACGCATGTTAAGTTGCAAGCAAATTCTTTTTCTTTTTCT
TTTTTTTTTCTTGAGACGGAGTCACCCAGGCTGGAGTGCAGTGGTGCGATCTCAGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTATCCTGCCT
CAGCCTCCCGAGCAGCTGGGACTACAGGCGTGCGCCACCATGCCTGGCTAATTTTTGTGTGTGTGTTTAGTAGTGACGGGGTTTCACCATGTTAGCCAGG
ATGGTCTCGATCTCCTGACCTCGTGATCCCCCCGCCTCTGCCTCCCAAAGTGCTGAGATTACAGGCTTGAGCCACCGCTCCCGGCCCGCAAGCAAATTCT
TTCAGTAAATTCTTGCATTAAACCTATGGTTTGATGGACATTTGGGTTTAGCGGACTTCATTGACACAGTAGGTACTGTGTGTTGGGATATAAAAGACTA
ATAAAGAGGTTCCTGGTCATGGAGCTTGCACTGGCTATTTTCCATTGTACAGGTTACTTAATCTCTGTCAAGTGAAGCTAATAGCATCTAACTCCAGGGT
TGTGACCTCTAAAGAGTTTTGAAAGATTGAAAACATTGTACCTATGTCATATTTAACAAGCCCCTTTTGAAGTCCTATATTTGTTTAGTAGACTGAAAAT
TTGAATTCACTGTTAAGAGGAGACATGGAACTGTGGAAAGAATATTCATTTGAGTGTTTCAGGAAGTTTGGATTTTTTTTTTACCAACATATTATTTGTA
AAAGGAGGGAAATCAGCTGCCTCAGGAGGTTCTTAACATATAGGAATGTAATTATCAGATTCAAAGCTGAACAGTAGTGCGTTGCCCTGTAACCTAAGTC
TTGGCTGTTAGCAAAGAAAAGCCAGTGTCTGGGGTATTGGTTCCAGGACCTTCCACTAATAACAAAATCCCAGGATGTTCCATCTCTTATATAAATGTAT
TTGCATATAACCTATGCACATCCTCCTGTATACTTTAGAAGTCTACATGTTTGGTACACATGCTTATTTTTCCACTGTTGAATCCATGGATGTGGAACTC
ACTGTATATAGTGTTAGGGGTTGATCACTGTAACCTGGAATGGGGGATACTTTTCGTTTTTGGCTGCGTGAGTGCTTAACAAGGACAGAACTGGGCGTTT
ACCTATGCATGCACATGTATTGCAGGCCCTGGCCAACGTCAACATTGGGAGCCTCATCTGCAATGTAGGGGCCGGTGGACCTGCTCCAGCAGCTGGTGCT
GCACCAGCAGGAGGTCCTGCCCCCTCCACTGCTGCTGCTCCAGCTGAGGAGAAGAAAGTGGAAGCAAAGAAAGAAGAATCCGAGGAGTCTGATGATGACA
TGGGCTTTGGTCTTTTTGACTAAACCTCTTTTATAACATGTTCAATAAAAAGCTGAACTTTA
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.