| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000621141 | G protein-coupled receptor 1 | protein coding | ENST00000488013 | 508 | 229 | UTR3 | Trans | |
| TCONS_00065859 | ubiquitin specific peptidase 12 | novel protein coding | ENST00000488013 | 604 | 241 | UTR3 | Trans | |
| TCONS_00065864 | long intergenic non-protein coding RNA 412 | novel protein coding | ENST00000488013 | 604 | 242 | UTR3 | Trans | |
| TCONS_00240685 | metastasis suppressor 1 | novel protein coding | ENST00000488013 | 525 | 233 | UTR3 | Trans |
>TCONS_00240685 (650 nt)
GGCGCAATCTCGGCTCACAGCAACCTCCGCCTCCCGGGTTCAAGCAATTCTCGTGCCTCAGCCCCGGGAGTAGCTGGGATTACAGGCGTGCACCACCACG
CCCGGCTAATATTGTATTTTTAGTAGAGGCGGGGTTTCTCCATGTTGGTCAGGCTGGTCACGAATTCCGGACCTCAGGTGATCCGCCTGCCTCGGCCTCC
CAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCGGCCCTGAGTGGACATTGTTAACCTCTTGTTTTAAATCAGCCGTGACGTTGCTTTCCATCTTC
TCTCCTGAGCTGTTTTCCTCAGCAGTGGGGGCCGGCTCTTGCCCCTGACGGGAATCCCAGTAAGGCATCCCCTTTTCTGACTACATTCTCCTTTTTTAGC
CCCAGGACCAAATTACCATCACAGGGTACGAAAAGAACACAGAAGCTGCCAGGGATGCTATACTGAGAATTGTGGGTGAACTTGAGCAGATGGTTTCTGA
GGACGTCCCGCTGGACCACCGCGTTCACGCCCGCATCATTGGTGCCCGCGGCAAAGCCATTCGCAAAATCATGGACGAATTCAAGGTGGACATTCGCTTC
CCACAGAGCGGAGCCCCAGACCCCAACTGCGTCACTGTGACGGGGCTCCCA
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.