| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000359543 | epithelial membrane protein 2 | protein coding | ENST00000489772 | 628 | 299 | UTR3 | Trans | |
| ENST00000375234 | AhpC/TSA antioxidant enzyme domain containing 1 | protein coding | ENST00000489772 | 592 | 309 | UTR3 | Trans | |
| ENST00000446045 | AhpC/TSA antioxidant enzyme domain containing 1 | protein coding | ENST00000489772 | 592 | 309 | UTR3 | Trans | |
| ENST00000524264 | SAP30L antisense RNA 1 (head to head) | antisense | ENST00000489772 | 603 | 302 | noncoding | Trans | |
| ENST00000572705 | transient receptor potential cation channel, subfamily V, member 1 | protein coding | ENST00000489772 | 601 | 305 | UTR3 | Trans | |
| TCONS_00095049 | epithelial membrane protein 2 | novel protein coding | ENST00000489772 | 628 | 299 | UTR3 | Trans | |
| TCONS_00095050 | epithelial membrane protein 2 | novel protein coding | ENST00000489772 | 628 | 299 | UTR3 | Trans | |
| TCONS_00095052 | epithelial membrane protein 2 | novel protein coding | ENST00000489772 | 628 | 299 | UTR3 | Trans | |
| TCONS_00107851 | transient receptor potential cation channel, subfamily V, member 1 | novel protein coding | ENST00000489772 | 601 | 305 | UTR3 | Trans | |
| TCONS_00135884 | zinc finger protein 347 | novel protein coding | ENST00000489772 | 574 | 298 | UTR5 | Trans | |
| TCONS_00215909 | O-acyl-ADP-ribose deacylase 1 | novel protein coding | ENST00000489772 | 608 | 302 | UTR3 | Trans | |
| TCONS_00240688 | metastasis suppressor 1 | novel protein coding | ENST00000489772 | 614 | 325 | UTR3 | Trans |
>TCONS_00240688 (1383 nt)
GGGCGGTGCCGAGGCTGGGGGCCGGTGGCGGATGGAGCCCGCGATGGAGCCGGAGACTCTGGAGGCGCGAATCAATAGAGCCACGAACCCCCTGAACAAG
GAGCTCGACTGGGCCAGCATCAACGGCTTCTGCGAGCAGCTCAACGAGGACTTTGAGGGGCCTCCACTCGCCACCCGGCTGCTGGCCCACAAGATCCAGT
CCCCACAGGAGTGGGAGGCGATCCAGGCCTTGACGGTGAGAAGGGGAGAGGCCACCATCCGTCCCCCGCCATGTGACGACACCAAGGGAGGCCAAGACTG
AGGTTCTTGGGGTCCATAAGGCTCTTCAGAGCCCAAGAGAGTTGTGCTAAGATGGCCCAGGATGGAGGTCCGGGCCTGCCCCAAGGGTCCCACCACAGCC
AGCGGGCTGGCCTCCCACCCCAGCATCCATACACGTAGGCCTGTTGCTGAGGGAAGGCCCTCTAGGGTCATCTGGTCCAGGGGTTCTTTGCTTCAGCTGC
ACATCGGCTGCCTCTCCAGGAAGCGTGTTCAACACATGGAATCAGGGCTCCACCCAGACCTGCCGAGGCCACACTCCTGGAGTATCTGCATCCAGAGATC
TGCACGTTTGTAAAGCTAAGGGGTGGTGCTTGGGCTCAGGCCTGAGGTTTTGCATCTGTTCAATAGCAGAGGAGAGAGGGGTGTACTGTCTGTGGCCCCC
AGCATGGGCCACATACCAACCCACCATGGAGCAAAGCTGATTTTAAGTGGTGGTAGAGATACAGTTTCTCTTTTAATACTTACGTGTTTAGTTGGGTGCA
GTGGCTTATACCTGTAATTTCAGCACTTGGGGAGGCCAAGGCAGGAGGCTTGCTTGAGGCAAGGAGTTCAAGGCTACAGTGAGCTATGATTGTGCCACTG
TACTCCAGACTGGACAACAGAGTGAGACCCCATCTCTAAATAATAATCATTATTGTTACATATTTGTTTTAACATTTTTTTCTCAAGTATAACTAGTCCT
ATGATTTCATAGATGTAGCTTAGGATAAGGCCAAGGTAGGTGTTGCCTATATAAGGTTTTTTTAAAAAAGGAAAAATAGGCCGGGCTGGTGGCTCACGCC
TGTAATCCCAGCACTTTGGCAGGCTGAGGCGGGCAGATCACCTGAGATCAGGAGTTCAAGATCAGCCTGACCAACATGGAGAAGCCCCATGTCTACTAAA
AATAAAAAATTAGCGAGGCGTGGTGGGCGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATCATTTGAACCCAGGAGGCAGAGGTTAC
AGTGAGCCGAGATCGTGCTACTGCATTCCAACCTGGGCAACAAGAGTGAAACTCTGTCTCAAAAAAAAAAAAAAAAAGGAAAAA
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.