| Potential function |
Interacting transcript |
Gene description |
Transcript biotype |
lncRNA id |
Alignment score (LAST) |
Alignment length |
Transcript region involved in interaction |
Genomic orientation of interacting RNAs |
|
|
ENST00000262461 |
solute carrier family 12 (sodium/potassium/chloride transporter), member 2 |
protein coding |
ENST00000496361 |
660 |
304 |
UTR3 |
Trans |
|
|
ENST00000263955 |
serine/threonine kinase 17b |
protein coding |
ENST00000496361 |
638 |
301 |
UTR3 |
Trans |
|
|
ENST00000324537 |
SH3-domain GRB2-like 3 |
protein coding |
ENST00000496361 |
609 |
307 |
UTR5 |
Trans |
|
|
ENST00000336505 |
suppressor of cancer cell invasion |
protein coding |
ENST00000496361 |
609 |
294 |
UTR3 |
Trans |
|
|
ENST00000336824 |
fibronectin type III domain containing 3B |
protein coding |
ENST00000496361 |
558 |
296 |
UTR3 |
Trans |
|
|
ENST00000338758 |
parvin, beta |
protein coding |
ENST00000496361 |
707 |
309 |
UTR3 |
Trans |
|
|
ENST00000375234 |
AhpC/TSA antioxidant enzyme domain containing 1 |
protein coding |
ENST00000496361 |
518 |
299 |
UTR3 |
Trans |
|
|
ENST00000381431 |
sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) |
protein coding |
ENST00000496361 |
624 |
294 |
UTR3 |
Trans |
|
|
ENST00000382044 |
tumor protein p53 binding protein 1 |
protein coding |
ENST00000496361 |
557 |
308 |
UTR3 |
Trans |
|
|
ENST00000397755 |
zinc finger family member 788 |
processed transcript |
ENST00000496361 |
599 |
313 |
noncoding |
Trans |
|
|
ENST00000399120 |
holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) |
protein coding |
ENST00000496361 |
590 |
300 |
UTR5 |
Trans |
|
|
ENST00000427746 |
holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) |
protein coding |
ENST00000496361 |
590 |
300 |
UTR5 |
Trans |
|
|
ENST00000446045 |
AhpC/TSA antioxidant enzyme domain containing 1 |
protein coding |
ENST00000496361 |
518 |
299 |
UTR3 |
Trans |
|
|
ENST00000448612 |
WD repeat domain 27 |
protein coding |
ENST00000496361 |
612 |
310 |
CDS |
Trans |
|
|
ENST00000467462 |
inter-alpha-trypsin inhibitor heavy chain family, member 4 |
processed transcript |
ENST00000496361 |
551 |
299 |
noncoding |
Trans |
|
|
ENST00000479069 |
bone morphogenetic protein receptor, type II (serine/threonine kinase) |
processed transcript |
ENST00000496361 |
545 |
295 |
noncoding |
Trans |
|
|
ENST00000494969 |
colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) |
protein coding |
ENST00000496361 |
621 |
301 |
CDS |
Trans |
|
|
ENST00000511184 |
E74-like factor 2 (ets domain transcription factor) |
nonsense mediated decay |
ENST00000496361 |
693 |
303 |
CDS_UTR |
Trans |
|
|
ENST00000550527 |
apoptotic peptidase activating factor 1 |
protein coding |
ENST00000496361 |
624 |
296 |
UTR3 |
Trans |
|
|
ENST00000569455 |
cadherin 13 |
processed transcript |
ENST00000496361 |
554 |
308 |
noncoding |
Trans |
|
|
ENST00000588483 |
tropomyosin 4 |
protein coding |
ENST00000496361 |
644 |
295 |
UTR5 |
Trans |
|
|
ENST00000607772 |
CNKSR family member 3 |
protein coding |
ENST00000496361 |
616 |
293 |
UTR3 |
Trans |
|
|
ENST00000620139 |
melanoregulin |
protein coding |
ENST00000496361 |
626 |
304 |
UTR3 |
Trans |
|
|
TCONS_00007944 |
kin of IRRE like (Drosophila) |
novel protein coding |
ENST00000496361 |
596 |
301 |
UTR3 |
Trans |
|
|
TCONS_00008112 |
nicastrin |
novel protein coding |
ENST00000496361 |
595 |
318 |
UTR3 |
Trans |
|
|
TCONS_00014134 |
collagen, type XVI, alpha 1 |
novel protein coding |
ENST00000496361 |
594 |
301 |
UTR3 |
Trans |
|
|
TCONS_00030130 |
calcium/calmodulin-dependent protein kinase II gamma |
novel protein coding |
ENST00000496361 |
615 |
284 |
UTR3 |
Trans |
|
|
TCONS_00030130 |
calcium/calmodulin-dependent protein kinase II gamma |
novel protein coding |
ENST00000496361 |
636 |
303 |
UTR3 |
Trans |
|
|
TCONS_00032161 |
transcription elongation regulator 1-like |
novel protein coding |
ENST00000496361 |
627 |
310 |
UTR3 |
Trans |
|
|
TCONS_00050195 |
FYVE, RhoGEF and PH domain containing 4 |
novel protein coding |
ENST00000496361 |
672 |
304 |
UTR5 |
Trans |
|
|
TCONS_00053421 |
apoptotic peptidase activating factor 1 |
novel protein coding |
ENST00000496361 |
624 |
296 |
UTR3 |
Trans |
|
|
TCONS_00053851 |
transmembrane protein 263 |
novel protein coding |
ENST00000496361 |
670 |
283 |
UTR3 |
Trans |
|
|
TCONS_00061878 |
transmembrane protein 116 |
novel protein coding |
ENST00000496361 |
691 |
299 |
UTR3 |
Trans |
|
|
TCONS_00065094 |
UBA domain containing 2 |
novel protein coding |
ENST00000496361 |
621 |
291 |
UTR5 |
Trans |
|
|
TCONS_00065097 |
UBA domain containing 2 |
novel protein coding |
ENST00000496361 |
621 |
291 |
UTR3 |
Trans |
|
|
TCONS_00065103 |
UBA domain containing 2 |
novel protein coding |
ENST00000496361 |
621 |
291 |
UTR5 |
Trans |
|
|
TCONS_00067572 |
DCN1, defective in cullin neddylation 1, domain containing 2 |
novel protein coding |
ENST00000496361 |
609 |
313 |
UTR3 |
Trans |
|
|
TCONS_00070064 |
gephyrin |
novel protein coding |
ENST00000496361 |
600 |
295 |
UTR3 |
Trans |
|
|
TCONS_00070307 |
pecanex homolog (Drosophila) |
novel protein coding |
ENST00000496361 |
614 |
290 |
UTR5 |
Trans |
|
|
TCONS_00107864 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
ENST00000496361 |
645 |
296 |
UTR3 |
Trans |
|
|
TCONS_00107864 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
ENST00000496361 |
643 |
298 |
UTR3 |
Trans |
|
|
TCONS_00107867 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
ENST00000496361 |
645 |
296 |
UTR3 |
Trans |
|
|
TCONS_00107867 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
ENST00000496361 |
643 |
298 |
UTR3 |
Trans |
|
|
TCONS_00108999 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000496361 |
622 |
302 |
UTR5 |
Trans |
|
|
TCONS_00108999 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000496361 |
637 |
302 |
UTR5 |
Trans |
|
|
TCONS_00109000 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000496361 |
637 |
302 |
UTR5 |
Trans |
|
|
TCONS_00109000 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000496361 |
622 |
302 |
UTR5 |
Trans |
|
|
TCONS_00109009 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000496361 |
637 |
302 |
UTR5 |
Trans |
|
|
TCONS_00109011 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000496361 |
609 |
302 |
UTR5 |
Trans |
|
|
TCONS_00109011 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000496361 |
587 |
299 |
UTR5 |
Trans |
|
|
TCONS_00109011 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000496361 |
637 |
302 |
UTR5 |
Trans |
|
|
TCONS_00109011 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000496361 |
622 |
302 |
UTR3 |
Trans |
|
|
TCONS_00109012 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000496361 |
637 |
302 |
UTR5 |
Trans |
|
|
TCONS_00109012 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000496361 |
622 |
302 |
UTR3 |
Trans |
|
|
TCONS_00109013 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000496361 |
622 |
302 |
UTR3 |
Trans |
|
|
TCONS_00109013 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000496361 |
637 |
302 |
UTR5 |
Trans |
|
|
TCONS_00109014 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000496361 |
622 |
302 |
UTR3 |
Trans |
|
|
TCONS_00109014 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000496361 |
637 |
302 |
UTR5 |
Trans |
|
|
TCONS_00109427 |
serine hydroxymethyltransferase 1 (soluble) |
novel protein coding |
ENST00000496361 |
610 |
303 |
UTR3 |
Trans |
|
|
TCONS_00119512 |
zinc finger and BTB domain containing 7C |
novel protein coding |
ENST00000496361 |
639 |
305 |
UTR3 |
Trans |
|
|
TCONS_00123889 |
ribosomal protein SA pseudogene 58 |
novel protein coding |
ENST00000496361 |
610 |
285 |
UTR5 |
Trans |
|
|
TCONS_00123899 |
ribosomal protein SA pseudogene 58 |
novel protein coding |
ENST00000496361 |
610 |
285 |
UTR5 |
Trans |
|
|
TCONS_00124891 |
zinc finger protein 540 |
novel protein coding |
ENST00000496361 |
671 |
291 |
UTR3 |
Trans |
|
|
TCONS_00132233 |
zinc finger protein 43 |
novel protein coding |
ENST00000496361 |
624 |
314 |
UTR5 |
Trans |
|
|
TCONS_00132247 |
zinc finger protein 43 |
novel noncoding |
ENST00000496361 |
601 |
295 |
noncoding |
Trans |
|
|
TCONS_00135884 |
zinc finger protein 347 |
novel protein coding |
ENST00000496361 |
560 |
312 |
UTR5 |
Trans |
|
|
TCONS_00140000 |
long intergenic non-protein coding RNA 152 |
novel protein coding |
ENST00000496361 |
538 |
296 |
UTR3 |
Trans |
|
|
TCONS_00147100 |
ATPase family, AAA domain containing 2B |
novel protein coding |
ENST00000496361 |
600 |
254 |
UTR3 |
Trans |
|
|
TCONS_00147113 |
ATPase family, AAA domain containing 2B |
novel protein coding |
ENST00000496361 |
600 |
254 |
UTR3 |
Trans |
|
|
TCONS_00147115 |
ATPase family, AAA domain containing 2B |
novel protein coding |
ENST00000496361 |
600 |
254 |
UTR3 |
Trans |
|
|
TCONS_00148698 |
WD repeat containing planar cell polarity effector |
novel noncoding |
ENST00000496361 |
612 |
271 |
noncoding |
Trans |
|
|
TCONS_00148704 |
WD repeat containing planar cell polarity effector |
novel protein coding |
ENST00000496361 |
612 |
271 |
UTR3 |
Trans |
|
|
TCONS_00148705 |
WD repeat containing planar cell polarity effector |
novel protein coding |
ENST00000496361 |
612 |
271 |
UTR3 |
Trans |
|
|
TCONS_00150045 |
ankyrin repeat domain 36C |
novel protein coding |
ENST00000496361 |
622 |
279 |
UTR3 |
Trans |
|
|
TCONS_00150051 |
ankyrin repeat domain 36C |
novel protein coding |
ENST00000496361 |
622 |
279 |
UTR3 |
Trans |
|
|
TCONS_00152107 |
cordon-bleu WH2 repeat protein-like 1 |
novel protein coding |
ENST00000496361 |
610 |
302 |
UTR5 |
Trans |
|
|
TCONS_00152126 |
cordon-bleu WH2 repeat protein-like 1 |
novel protein coding |
ENST00000496361 |
610 |
302 |
UTR5 |
Trans |
|
|
TCONS_00152127 |
cordon-bleu WH2 repeat protein-like 1 |
novel protein coding |
ENST00000496361 |
610 |
302 |
UTR5 |
Trans |
|
|
TCONS_00153158 |
serine/threonine kinase 17b |
novel protein coding |
ENST00000496361 |
638 |
301 |
UTR3 |
Trans |
|
|
TCONS_00168219 |
THO complex 5 |
novel protein coding |
ENST00000496361 |
559 |
271 |
UTR3 |
Trans |
|
|
TCONS_00168220 |
THO complex 5 |
novel protein coding |
ENST00000496361 |
559 |
271 |
UTR3 |
Trans |
|
|
TCONS_00170642 |
solute carrier family 6 (neurotransmitter transporter), member 6 |
novel protein coding |
ENST00000496361 |
548 |
298 |
UTR3 |
Trans |
|
|
TCONS_00173724 |
cms1 ribosomal small subunit homolog (yeast) |
novel protein coding |
ENST00000496361 |
655 |
305 |
UTR5 |
Trans |
|
|
TCONS_00173729 |
cms1 ribosomal small subunit homolog (yeast) |
novel protein coding |
ENST00000496361 |
655 |
305 |
UTR5 |
Trans |
|
|
TCONS_00182243 |
homogentisate 1,2-dioxygenase |
novel protein coding |
ENST00000496361 |
656 |
311 |
UTR3 |
Trans |
|
|
TCONS_00184373 |
neutral cholesterol ester hydrolase 1 |
novel protein coding |
ENST00000496361 |
625 |
302 |
UTR3 |
Trans |
|
|
TCONS_00185516 |
transcribed_unprocessed_pseudogene |
novel protein coding |
ENST00000496361 |
669 |
298 |
UTR3 |
Trans |
|
|
TCONS_00185519 |
transcribed_unprocessed_pseudogene |
novel protein coding |
ENST00000496361 |
669 |
298 |
UTR3 |
Trans |
|
|
TCONS_00186316 |
KIAA0232 |
novel protein coding |
ENST00000496361 |
604 |
302 |
UTR5 |
Trans |
|
|
TCONS_00187473 |
spermatogenesis associated 18 |
novel noncoding |
ENST00000496361 |
619 |
297 |
noncoding |
Trans |
|
|
TCONS_00190276 |
transmembrane protein 144 |
novel protein coding |
ENST00000496361 |
631 |
308 |
UTR3 |
Trans |
|
|
TCONS_00194682 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000496361 |
693 |
303 |
UTR3 |
Trans |
|
|
TCONS_00194686 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000496361 |
693 |
303 |
UTR3 |
Trans |
|
|
TCONS_00203663 |
ribosomal protein L3 pseudogene 6 |
novel protein coding |
ENST00000496361 |
612 |
293 |
UTR3 |
Trans |
|
|
TCONS_00203663 |
ribosomal protein L3 pseudogene 6 |
novel protein coding |
ENST00000496361 |
563 |
312 |
UTR3 |
Trans |
|
|
TCONS_00210637 |
polymerase (DNA directed), eta |
novel protein coding |
ENST00000496361 |
601 |
304 |
UTR3 |
Trans |
|
|
TCONS_00219475 |
WD repeat domain 27 |
novel protein coding |
ENST00000496361 |
612 |
310 |
UTR3 |
Trans |
|
|
TCONS_00222403 |
protein tyrosine phosphatase, non-receptor type 12 |
novel protein coding |
ENST00000496361 |
651 |
310 |
UTR5 |
Trans |
|
|
TCONS_00222612 |
carnitine O-octanoyltransferase |
novel protein coding |
ENST00000496361 |
585 |
297 |
UTR3 |
Trans |
|
|
TCONS_00222619 |
carnitine O-octanoyltransferase |
novel protein coding |
ENST00000496361 |
585 |
297 |
UTR3 |
Trans |
|
|
TCONS_00222623 |
carnitine O-octanoyltransferase |
novel protein coding |
ENST00000496361 |
585 |
297 |
UTR3 |
Trans |
|
|
TCONS_00225244 |
family with sequence similarity 115, member C |
novel protein coding |
ENST00000496361 |
633 |
310 |
UTR3 |
Trans |
|
|
TCONS_00225245 |
family with sequence similarity 115, member C |
novel protein coding |
ENST00000496361 |
578 |
299 |
UTR3 |
Trans |
|
|
TCONS_00225246 |
family with sequence similarity 115, member C |
novel protein coding |
ENST00000496361 |
633 |
310 |
UTR3 |
Trans |
|
|
TCONS_00225248 |
family with sequence similarity 115, member C |
novel protein coding |
ENST00000496361 |
578 |
299 |
UTR3 |
Trans |
|
|
TCONS_00235281 |
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 |
novel protein coding |
ENST00000496361 |
622 |
305 |
UTR5 |
Trans |
|
|
TCONS_00235393 |
processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae) |
novel protein coding |
ENST00000496361 |
621 |
317 |
UTR5 |
Trans |
|
|
TCONS_00237103 |
cathepsin B |
novel protein coding |
ENST00000496361 |
604 |
289 |
UTR5 |
Trans |
|
|
TCONS_00237103 |
cathepsin B |
novel protein coding |
ENST00000496361 |
645 |
303 |
UTR5 |
Trans |
|
|
TCONS_00239255 |
tumor protein D52 |
novel protein coding |
ENST00000496361 |
664 |
294 |
UTR3 |
Trans |
|
|
TCONS_00239255 |
tumor protein D52 |
novel protein coding |
ENST00000496361 |
629 |
303 |
UTR3 |
Trans |
|
|
TCONS_00240045 |
zinc finger protein 706 |
novel protein coding |
ENST00000496361 |
602 |
306 |
UTR3 |
Trans |
|
|
TCONS_00240046 |
zinc finger protein 706 |
novel protein coding |
ENST00000496361 |
602 |
306 |
UTR5 |
Trans |
|
|
TCONS_00249092 |
transmembrane protein 245 |
novel protein coding |
ENST00000496361 |
613 |
282 |
UTR5 |
Trans |
|
|
TCONS_00249683 |
suppressor of cancer cell invasion |
novel protein coding |
ENST00000496361 |
609 |
294 |
UTR3 |
Trans |
|
|
TCONS_00252827 |
discs, large homolog 3 (Drosophila) |
novel protein coding |
ENST00000496361 |
642 |
296 |
UTR5 |
Trans |