Detailed information on ENST00000496650

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000382142 myotubularin related protein 12 protein coding ENST00000496650 610 277 UTR3 Trans
TCONS_00202828 myotubularin related protein 12 novel protein coding ENST00000496650 610 277 UTR3 Trans

Sequence

>TCONS_00202828 (474 nt)
TAGAAGTGGAGGGGCCGTTCGAAGAGTCGTGAGGGGGTGACGGGTTAAGATTCGGAGAGAGAGGTGCTAGTGGCTGGACTTGACCTGGAAAGGATCTTGC
TTTGTTGCCCAGGCTGGAGTGCAGGAGCACAATCTCAGCTCACTGCAACCTCTGTCTCCCAGGCTCAAGCAATCTTCCCATCTCAGCCTTTCGAGTAGCC
GGGACTACAGGCATGCACCACCACGCCCAGCTAATTTTTTGTATTTTTGATAGAGTCGGGGCTTTGCCATGTTGCCCAGGCTGGTCTCAAACTCCTGAGC
TTAAGCAGTCTGCCCACCTTGGCCTCTTAGAGTGCTGGGATTACAGGCATGAGCCACCATGTCCAGCCTCATTTGCATTCTTGTACTGCATTTTCATTAA
ATCATTCAAGTTCCTTTTATCTTGTGTAACATATTTAATTGCATTTTCCTACTGAATAAAAAAAAGGGAACAGTT

Expression



Full and truncated open reading frames discovered in TCONS_00202828

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.