Detailed information on ENST00000498905

lncRNA-RNA interactions

Number of interactions: 3

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000441159 family with sequence similarity 115, member C protein coding ENST00000498905 554 380 UTR3 Trans
TCONS_00225245 family with sequence similarity 115, member C novel protein coding ENST00000498905 554 380 UTR3 Trans
TCONS_00225248 family with sequence similarity 115, member C novel protein coding ENST00000498905 554 380 UTR3 Trans

Sequence

>TCONS_00225248 (2708 nt)
GCAGGTTCCAGCCCCGACCCGGGCGCGCGGGGCCGACTAGGGTCGGGTCCAGTGTGCGGTGGTCGCTCCGCTCCGGGCCGCTCCGCTCTGGGCGTCAGGG
CGCGGGGAGCTGCCCCGGGGTTCTGTCCACCGGGGAGGAAAGCCACGAGCACTGAGCGCCTCCTGAGAGCCAGCCCTGACGTGAACTCATTTTATCTGCC
ACGACCCAGAAGGAGTCTACTGCTAAGATTTCAGCATGTCCTGTGGCTGAGTTAATCAGAGTTATGACAGGAAGGTACCGGGCACACCATCGCAATGCTC
CATCAATGCTAGTATGTTGTGTTCTTTCCTTCATATCAAGTCAACTCAAGCTTGCTCTACTTACCTGGTGTACACAGTCTAAGAACTGTAAGAAGACTGG
AGCAAAACCACTCCCCTGACAGTTGAGGGTCAAGCTGCTCCTCTGACTGAATTTGTGACCAAAAGAGAGCCACTCTTTTTCAACCAACATCTGGAAGCCT
TCAAGTGTCCTATAAAAGGGATCACTGAGTAACTGAACCAGGGATGTCACCTAGGGCATAAGCAGGATGGATTGTCATTAATTTTAGTTCTGAAAAAGGC
CTATTACTAAGATAAAAGCACTTCCTTCTGATGATAGCTAATTCACAAATTTACCTGGACAGCAAATTTGTTCACTAACCATTCCAGGATGGCCAATAAA
ATTAATTTTGTAAACTTGCCAGTAAAAACTAAAGCTCAAATTCATTTTGGCTACAAGTTTACTTTCAGGGAATTGAGACTTTAATCCTTAACTGGCCAGT
TTGCTGACAGCAACCTTTTCCTAAGTTAATCAGAGGCCAGAGGATCAGTTAAAATCAATTCTACTTTTTGGCAGATGCAGATTAATGTCTTAATGTAGTC
TGAACTCACACTTTTCACTCTGGAGTGAGTTAAGGCGGGGCTTATAGAGAGCCAGGGGATGGACTGACAAAACCCAGGAAGGATGGTCCACGCCTCACAC
TGCTGGTCAAGGGCTCCATCCGCAAGCCTGCATGGTACATCTGTGGATGGGAGAGCTTGATGCCCGGAGCCAGAGCTCCAGGCTGCGTAGGGGCTAAGAG
CTCATGGTACGGAGTTTTCTGATGGATACCAGGTGCTGTTTAACACAGGACTTTCTCTGTCCATAAACACATTAGTCATTATACAAAAGAGTCATCTGAA
GAATTTAAAAATGACCAAATGGAAATATAAATATAAAATATCAAAAAATATGTCTAATAGTTTACTTGTGCAGTGATGTCCCAGCCTTCCTCCAAACAGA
CCAAAACTGAGGAACCATTCTCAAGTACTTCTGATACAACCACAGCCAGCTGCATTATCCTGTGAAGCTAAGAGACAGGAAGGAGAACACAATTAGACCA
AGCGCTTTCTGAGTGCAGAAGTCAGAGAGAGTTGCTTTCAACCCTGGATAATCAAACGACTTAGGGATAAAGCGCTTGCACAAAAGAACCACATAATGTT
TTAAATACCTAAAGTTCTTTCAAATCAAGATTAAACAATGACACTTTTGACTGGATGCAATGACTCATGCCCATAATCCCAGCACTTTGGGAGGCCGAGC
CGGGCAGGTCATTTGAGGTTCGGAGTTCGAGACCAGCCTGGGCAACATAAGCAAGACCCTGTCTCGAAAAATAAAAATAAAAAAGATACTCCTATTTGTC
TATACTGTGTACTAAATGAGAAAAAAACTTTCAATATATTTGTGCTAAGTTTTTAAAGCCACATCAATTGGCTCAAAGTCCTTAATAAACAATTAAGGTA
TGAGAATAGTATATAGATTTTAAAACCAGATGTATAACATTGTAATTTTAAAAAATATTTTAATGATCATCAGACATAATTTGCAATTTGAATCCAACTC
TGAACAAGAACAAAAATGAAAAAACCCATCTCTTAAACAGAGCTAGGCTACTTTAAACACAGGAATAAGGCAAATGCCCTACTCAGTAATGAGAAGCTCC
TCATGTAACTGTTTCTACAACATAGCTATCACCAGGCCTGAATTCTTTTGGGCTCAGAATTTGTTCTAAGAAATGGCTATTATTAAAAAGTCAAAAAATA
ACAGATGCTGGCGAGCCTGTGGAGAAAAGGGAATGTATATACATTTCTGGTGGGAATGTAAATTAGTTCAGCCATTGTAGAAAGTAGTTTGGTGATTTCT
CAAATAACTTAAAACAGAATTACCATTTGACCTAGCAATCCCATTACTGAGTATATACCCAAAGGAATATAAATTGTTCTACCATAAAGTCACATGCACA
CACATGTTCAGTGCTGTACTATTCACAATAGCAAAGACATGGAGTCAACCTATATGCCCATCAACGGTAGACTGGATAAAGAAAATATGGTACATATACA
CCATGGAATACTACACAGCCATAAAAAGAATGAGCTTATGTCCTTTGCAGTAACACAGCTGAAGCAAACTAACACAGGAATGGAAAACCAAATACTGCAT
ATTCTCACTTATAAGTGGGAGCTAAACATTGAGTACACATGGACACAAAGAAAGGAATAGACGCCTGGGGCGTATTTGAGGTTGGAGGTGAGAGGAGGGT
GAGGATAGAAAAACTACCTATCAGGTACTATGCTTATTACCTGGGTGATGAAATAATCTGTACACCAAACTCCCAAGATATGCAATGTACCTATACAACA
AACCTACAT

Expression



Full and truncated open reading frames discovered in TCONS_00225248

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.