| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000263955 | serine/threonine kinase 17b | protein coding | ENST00000500276 | 640 | 301 | UTR3 | Trans | |
| ENST00000264914 | arylsulfatase B | protein coding | ENST00000500276 | 609 | 300 | UTR3 | Trans | |
| ENST00000375120 | OTU deubiquitinase 3 | protein coding | ENST00000500276 | 604 | 301 | UTR3 | Trans | |
| ENST00000382044 | tumor protein p53 binding protein 1 | protein coding | ENST00000500276 | 580 | 308 | UTR3 | Trans | |
| ENST00000448612 | WD repeat domain 27 | protein coding | ENST00000500276 | 504 | 312 | CDS | Trans | |
| ENST00000450928 | antisense | antisense | ENST00000500276 | 555 | 302 | noncoding | Trans | |
| ENST00000534514 | flavin containing monooxygenase 3 | processed transcript | ENST00000500276 | 522 | 296 | noncoding | Trans | |
| ENST00000572705 | transient receptor potential cation channel, subfamily V, member 1 | protein coding | ENST00000500276 | 650 | 312 | UTR3 | Trans | |
| TCONS_00014134 | collagen, type XVI, alpha 1 | novel protein coding | ENST00000500276 | 610 | 301 | UTR3 | Trans | |
| TCONS_00017972 | transcribed_unprocessed_pseudogene | novel protein coding | ENST00000500276 | 585 | 306 | UTR3 | Trans | |
| TCONS_00030130 | calcium/calmodulin-dependent protein kinase II gamma | novel protein coding | ENST00000500276 | 662 | 284 | UTR3 | Trans | |
| TCONS_00065093 | UBA domain containing 2 | novel protein coding | ENST00000500276 | 620 | 289 | UTR5 | Trans | |
| TCONS_00065094 | UBA domain containing 2 | novel protein coding | ENST00000500276 | 620 | 289 | UTR5 | Trans | |
| TCONS_00065103 | UBA domain containing 2 | novel protein coding | ENST00000500276 | 620 | 289 | UTR5 | Trans | |
| TCONS_00067572 | DCN1, defective in cullin neddylation 1, domain containing 2 | novel protein coding | ENST00000500276 | 672 | 311 | UTR3 | Trans | |
| TCONS_00098644 | fatty acid 2-hydroxylase | novel protein coding | ENST00000500276 | 610 | 308 | UTR3 | Trans | |
| TCONS_00098645 | fatty acid 2-hydroxylase | novel protein coding | ENST00000500276 | 610 | 308 | UTR3 | Trans | |
| TCONS_00098647 | fatty acid 2-hydroxylase | novel protein coding | ENST00000500276 | 610 | 308 | UTR3 | Trans | |
| TCONS_00107851 | transient receptor potential cation channel, subfamily V, member 1 | novel protein coding | ENST00000500276 | 650 | 312 | UTR3 | Trans | |
| TCONS_00107851 | transient receptor potential cation channel, subfamily V, member 1 | novel protein coding | ENST00000500276 | 607 | 277 | UTR5 | Trans | |
| TCONS_00107864 | transient receptor potential cation channel, subfamily V, member 1 | novel protein coding | ENST00000500276 | 607 | 277 | UTR3 | Trans | |
| TCONS_00118919 | potassium channel tetramerization domain containing 1 | novel protein coding | ENST00000500276 | 621 | 303 | UTR3 | Trans | |
| TCONS_00153158 | serine/threonine kinase 17b | novel protein coding | ENST00000500276 | 640 | 301 | UTR3 | Trans | |
| TCONS_00159938 | zinc fingers and homeoboxes 3 | novel protein coding | ENST00000500276 | 609 | 305 | UTR3 | Trans | |
| TCONS_00163084 | T-cell lymphoma invasion and metastasis 1 | novel protein coding | ENST00000500276 | 602 | 285 | UTR5 | Trans | |
| TCONS_00205414 | prolyl 4-hydroxylase, alpha polypeptide II | novel protein coding | ENST00000500276 | 602 | 301 | UTR3 | Trans | |
| TCONS_00215909 | O-acyl-ADP-ribose deacylase 1 | novel protein coding | ENST00000500276 | 606 | 301 | UTR3 | Trans | |
| TCONS_00219475 | WD repeat domain 27 | novel protein coding | ENST00000500276 | 504 | 312 | UTR3 | Trans | |
| TCONS_00224726 | caldesmon 1 | novel protein coding | ENST00000500276 | 552 | 289 | UTR3 | Trans | |
| TCONS_00224728 | caldesmon 1 | novel protein coding | ENST00000500276 | 552 | 289 | UTR3 | Trans | |
| TCONS_00235393 | processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae) | novel protein coding | ENST00000500276 | 610 | 306 | UTR5 | Trans | |
| TCONS_00240688 | metastasis suppressor 1 | novel protein coding | ENST00000500276 | 615 | 300 | CDS_UTR | Trans | |
| TCONS_00240688 | metastasis suppressor 1 | novel protein coding | ENST00000500276 | 605 | 307 | UTR3 | Trans |
>TCONS_00240688 (2609 nt)
CGCGGGGGCGCCCCCCTCGGCCGGGCGCTCGGGTTTCAGCCGCCGCTCCTCCGCGCCCCGCCCGCGCCTGGCCCGCTCGCCGGCGCCGGGAGAGACCTCG
TAACGGAACTGGGACGCCAGCGCTGCATTGTGGGAGCTTTTAAAGCGGCGGGGAGCTCGGCGCGACCCTCGGGCCCACCGGGCCACGCTCGCCCGGCCCG
CGACGCCCCCCCGCTGTCGCCTGGCCCGCGACGCACCGAGGCCTGAGGACCCGAAAGCCGGGCGCGGGGAGATGACCGGTGGCTCGTGACGGTCCCACGG
GCAAAATCTTCCATCGCCCGGGGCTGAGACTTGTCAAACTGCCCTCTACGGTCACCCGGAAAGTAGGAGGCTTTTTCTGCAGAGGGGAAAAAAATCAAAA
AGAGCCGTTCCATCCCCCCTCCAAGGACTGGGTTTGAATTGCTTTTCATCTGCAGTGGCTGTGATTCAGCGTCCCTCTTAGCAGCAGGCAATGACAGAGG
CAGGAGAGGGGAAAAAAAAAAAGAAAGAAAGAAAAAACACAGCAAATGAATCAAACGGACGTAGCAGGCAAGAGTGTGGTTATCGTTGGACCAGGATTCA
GGATCTGACTGAGTAGCTGACTCTTAATCCAGTTTGTGTTGATCACCAGGAGGATCTGGACCTCAGTATTACCACATCTAGAGCTATAATCACATCCCTG
TTAAGCCTTCCTGAGATCACACCAAATGTCCTTGATGGGAATTGTAAACAACCCTTACTTCTGGTTTCTAATGATATTCCAGGAAAGGAGCCTAACTAGA
GTCAGTGATATGCCAACTCCACCTTTGCCTTCCACCATGTTTGGAAGCTCCCTGAGGCCTCACCAGGAGCAGATGCTCGTCCCATGCTTCCTATAAGCCT
GCAGAACTGGAAAAGAAAGCTGGATAAAGTATTTATAGAAGATAGAGGACCTGTGGTGGCTCATGCCTGTAATCCAAGGTGGAAGGATTGCTTGAGGCCA
GAAGTTCAAGACCAGTCCAAGCAACATAGCAAGGCCCCATCTCTACAAAAAATGAAAATAAAATTAGCCGAGCGTGATGGCTCATGCCTGTAGTTCTAGC
TTCTAGAGAGGCTGAGGCAGGAGGATTGCTTGAGTCCAGGAGTTCAAGATTACAGTGAGCTATGGTCACACCACTGCACTCCAGCCTGGGTGATGGAGTG
AGACTGTCTCAATAAAAAGACAAAAAGGCTGGCCAGGGGCAGTGGTTCATGCCTGTAAACCCAGCACTTTGGGAGGCAAAGGCAGGAGGATTGCTTAAGC
CCAGGAATTTGAGATCAGCCTGGACAACATGGTCAAGGAAGCTTTTCCTGATCCACTAACTAAGGACAATCAAACCCTTCATGATCTAGAATCTGGAGAC
TGTGTCTTCTGGGAATAGTATCAGAGAAAGACTGCCCTTACTGCCCACATGTAGCAAAACTTTGAGACGTTGAATTATGGGTCCATAATCTCACAACTCA
GAGGGGCACCTCTAGACTCTTGGAACTGTATATCTATTGGAGACTTTAAGGTAAAGCTGAACAGAGAGACGTTTTTCTCCAGAAGCAGACAGCACCATAG
TCATGGACAGCTTTCCCAAGATCACAGATCAAGACTTCTCTGCCGTCATGAGACTCATAACCTCTTAATTTTTTCTTGCTTATGCTTCTGTGAACAATAG
AATTGGAAAAGGGGTGGTCCCGCGTGCACCCATAGGGTATACTTTTATTTGTGGAGGATTTTGCTGCCAACCTTATACATGGGCAAACTTATGCCTTCAT
GGATGGAAGATAAAGGGCTAATATGGGTTAGAAATTTTAATGGTACCTTTGTTTCTCCATAATCATTCAGAAACAGAACACTGGTCCACTCTTGTTAACC
TACATCATAGGTTGAAGAGAACATTGCCAGGAGGCCTTCATCCTTCCAGATGGGCACCATTTGTTGGGTCTTTTTCCGTGGTATGAAGAAAATGAAGCAA
TGATTAGAAATTGGTCCCTCGGCCGGGCACAATGGCTCATGCCTGTAATCCCATCACTTTGGCAGGCCGAGGCGGGTGGATCACCTGAGGTCAGGAGTTT
GAGACCAGCCTGACCAATGTGGTGAAACGCCATCTCTACTAAAAATACAAAAATTAGCTGGGTGTGATGGTGCACACCTGTAATCCAGCTACTCGGGAGG
CTGAGACAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCAAGATCACCCCACTGCATTCCAGGTTGGGCAACAGAGCAAGACTCTGTCT
CAAAAAAAAAAGAAGAAAGAAAGAAATTGATCCCTCATAATAGGCTGTATAGCAGATTCTACTGCAAAGGCTATGGTTGCACAACAGACTTCTTTGAATT
TGCTTGCTAAACTTTTACTGGATAATACTGGGATTACAGGTGTGAGCCACTGTGCCCAGCCTCTCCTGTTTAACTGTATTCATTCTAATGTTTACTTACT
TCTTTAATTTGTAAAATTGGGTCACTTAGAGTTTTTTTAGCCTATCTTGCCATTTAGCCACTGTTACTGATAATTTGGATGGAAAAGAAAAATAAATTAT
ATCACCTCTC
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.