Detailed information on ENST00000501665

lncRNA-RNA interactions

Number of interactions: 3

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000482603 glyoxylate reductase/hydroxypyruvate reductase processed transcript ENST00000501665 548 284 noncoding Trans
ENST00000498813 delta(4)-desaturase, sphingolipid 1 processed transcript ENST00000501665 512 278 noncoding Trans
TCONS_00195633 aspartylglucosaminidase novel protein coding ENST00000501665 505 269 UTR3 Trans

Sequence

>TCONS_00195633 (1383 nt)
GCGTGCCGCTGCAAACTGGCCTCTGGGCCGGGGGCGAGCAGCCCCCGGGAGGCCGAGTGCATCTGTTGGACCGTGCGAGGAGAAGAAAAAAAATATCGGC
CAGAGGAGAGGAACTAACCGAACATTCTTCCTCCCTACCTTATAGAGGGGAGTGGTCATCTACACTAAAGCAAAGTGTTAGGCGCGTCCGTGCGAAGAGA
CCACCAAACAGGCTTTGTGTTCCTTATCACAGGAAGAAAATTTTCCTTGACCTTTAGGTGCTTTTATATTCATCTCAAAAACAAAATTCTGAACTCAGGA
CTTGGCAAACCACCGCTGAAACTTCACTTCTACACAGAGGCTTTCTTTCCCAGAAACCCAGACCAGATGGAGTTTCACTCTGTCGCCCAGGCTGGAGTGC
AGTGGCACGATCTCGGCTGACTGCAGCCTCTACCTGCTGGGTTCAAGCAATTCTTCTGCCTCAGGTTCCTGAGTAGCTGGGATTACAGGTGCGCACCACC
ATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACGAGGTTTCACCACGTTGGCGAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACTGCCTCGGCC
TCCGAAAATCTGGAATTATAGATGTGAGCCACTGCGCCAGGCCTGTAATTTTATGTATCTTTATGTGATTATTTGAATGTCCCTCTCTGACTAGATTATA
AATTCTAAGGATAGTGTGTCTATTTTTGCTTACCTTTTATCCCCAGCACCTAGTCTAACACTTTACAAATATATATTAAATTAATATTTTGATAAGTTAC
TCAAAGTGCTACATAAAACAAAATTATAGAAAATAGTACTTTGGTAACTGTTTCGTTTTATCATTGCTTTCATTATTTCTCTGTTAACCTCAGTTTACAA
CTGAAAAAGACAAATTGTATATTATTCAGGCAATTTATTAAACATTACCTATAGAATATTATGATCTGTATTTTACAGAAGTTAAAAAGTGATGTATTAG
TATTCATAACAACTGCTCCATGCAGGAGTAATAGAAGTCAACATTAAGCCCAACTCTATTTTCAGACCAACCATGCAACTTTAGATCAGAGGACACATGG
GACTCTGCATCTTAATTCCTAAATTTACAGTCAAAGACATTTTCAGAGATAAGTATTATGAATTCAATAAGAATCTAAAGTAAGTTCTTAAGGCAAATAG
CTATAAAAGAGAAGAATCCTTAGTCTCTCATCTTCTAAAAACAGCTTCACAAATAATTTGGAAAATCAGCCTAAAGGTAAATAGAAACTGCATTTCCCCT
CCATTCTTGAAGCCAATCTTTTTCAAGAAATGACTAAGCAGCACCTGTTGTTGAAGACAGCAATAAAGCCTGAACCTGACACTC

Expression



Full and truncated open reading frames discovered in TCONS_00195633

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.