Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
---|---|---|---|---|---|---|---|---|
ENST00000261486 | erythrocyte membrane protein band 4.1 like 4A | protein coding | ENST00000506875 | 798 | 271 | CDS | Cis | |
ENST00000507810 | erythrocyte membrane protein band 4.1 like 4A | processed transcript | ENST00000506875 | 798 | 271 | noncoding | Cis | |
ENST00000513333 | erythrocyte membrane protein band 4.1 like 4A | processed transcript | ENST00000506875 | 798 | 271 | noncoding | Cis | |
ENST00000515047 | erythrocyte membrane protein band 4.1 like 4A | retained intron | ENST00000506875 | 798 | 271 | noncoding | Cis | |
ENST00000621003 | erythrocyte membrane protein band 4.1 like 4A | protein coding | ENST00000506875 | 798 | 271 | CDS | Cis | |
TCONS_00204910 | erythrocyte membrane protein band 4.1 like 4A | novel protein coding | ENST00000506875 | 798 | 271 | CDS | Cis | |
TCONS_00204911 | erythrocyte membrane protein band 4.1 like 4A | novel noncoding | ENST00000506875 | 798 | 271 | noncoding | Cis |
>TCONS_00204911 (493 nt)
GGGATGGAGGGGTTGGCAGCAGCACAGCATAGCAGAATTTTCTGATTCACTACCACTGCTGGTGTTACAGCGTGAACGTGACCTGAAGACAAAAAGGCTG
TACAGAATCATTGTCACTTCCACAGGAGGGGTTTCGGCGACGCGTGTAAGGGAACTTTGGCGACTTAGTGCGATCACTGGGAGAATTGTAGAGTCCACTG
GAGAGAAAGAAAAATGGTCAAAAAGAGCCCAGAGAGTTCCTGGGGGAAAACACACCGCAGCCCAGACCTATTCATAACTGCACAGCTGGTACTTCCAGAG
GCACATGCACCAGGGGCACGTGGTTCTCTTTGCTGACAAGATTTATTAAAAGAAAAGAGGAAAGAACTATTCTAAAATGGACCCTCCCTCCAAAAAAGCC
CAAACAGCCAAAGCAATTCTAAGCAGAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTGTACTACAAGGCTACAGTAACAAAAA
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.