| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000261486 | erythrocyte membrane protein band 4.1 li... | protein coding | ENST00000506875 | 798 | 271 | CDS | Cis | |
| ENST00000507810 | erythrocyte membrane protein band 4.1 li... | processed transcript | ENST00000506875 | 798 | 271 | noncoding | Cis | |
| ENST00000513333 | erythrocyte membrane protein band 4.1 li... | processed transcript | ENST00000506875 | 798 | 271 | noncoding | Cis | |
| ENST00000515047 | erythrocyte membrane protein band 4.1 li... | retained intron | ENST00000506875 | 798 | 271 | noncoding | Cis | |
| ENST00000621003 | erythrocyte membrane protein band 4.1 li... | protein coding | ENST00000506875 | 798 | 271 | CDS | Cis | |
| TCONS_00204910 | erythrocyte membrane protein band 4.1 li... | novel protein coding | ENST00000506875 | 798 | 271 | CDS | Cis | |
| TCONS_00204911 | erythrocyte membrane protein band 4.1 li... | novel noncoding | ENST00000506875 | 798 | 271 | noncoding | Cis |
>ENST00000506875 (494 nt)
GGGATGGAGGGGTTGGCAGCAGCACAGCATAGCAGAATTTTCTGATTCACTACCACTGCTGGTGTTACAGCGTGAACGTGACCTGAAGACAAAAAGGCTG<br />TACAGAATCATTGTCACTTCCACAGGAGGGGTTTCGGCGACGCGTGTAAGGGAACTTTGGCGACTTAGTGCGATCACTGGGAGAATTGTAGAGTCCACTG<br />GAGAGAAAGAAAAATGGTCAAAAAGAGCCCAGAGAGTTCCTGGGGGAAAACACACCGCAGCCCAGACCTATTCATAACTGCACAGCTGGTACTTCCAGAG<br />GCACATGCACCAGGGGCACGTGGTTCTCTTTGCTGACAAGATTTATTAAAAGAAAAGAGGAAAGAACTATTCTAAAATGGACCCTCCCTCCAAAAAAGCC<br />CAAACAGCCAAAGCAATTCTAAGCAGAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTGTACTACAAGGCTACAGTAACAAAAA
In silico ORF/peptide predictions
>peptide 1 (91 aa)
GWRGWQQHSIAEFSDSLPLLVLQRERDLKTKRLYRIIVTSTGGVSATRVRELWRLSAITGRIVESTGEKEKWSKRAQRVPGGKHTAAQTYS
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.