| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000489959 | carcinoembryonic antigen-related cell adhesion molecule pseudogene 10 | processed transcript | ENST00000507968 | 832 | 346 | noncoding | Trans | |
| ENST00000578119 | DSG1 antisense RNA 1 | antisense | ENST00000507968 | 791 | 287 | noncoding | Trans | |
| ENST00000582217 | myosin ID | processed transcript | ENST00000507968 | 1006 | 347 | noncoding | Trans |
>ENST00000582217 (572 nt)
AGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGTGGGCGCCCCTCCCCCAGCCTCGCTGCCGCCTTGCAGTTTGATCTCAGAC
TGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCGGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAA
AGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAG
GTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACC
TCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGGTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCAACAA
TTGTATTTTGGGATCTCTACTGTGCAGCTCCAGAGAGACGTGAAACATGTGAACACTCAAGTGAAGCAAAAGC
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.