| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000427746 | holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) | protein coding | ENST00000508319 | 554 | 279 | UTR5 | Trans | |
| ENST00000450928 | antisense | antisense | ENST00000508319 | 501 | 281 | noncoding | Trans | |
| ENST00000473091 | UBA domain containing 2 | processed transcript | ENST00000508319 | 528 | 279 | noncoding | Trans | |
| ENST00000494969 | colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) | protein coding | ENST00000508319 | 549 | 277 | CDS | Trans |
>ENST00000494969 (590 nt)
ATTAGAAGACACCTACTTTGATAGAGATGTGGAGAAGGCATTTATGAAGGCTAGCTCTGAACTCTTCAGTCAGAAAACAAAGGCATCTTTACTTGTATCA
AATCAAAATGGAAATATGTACACATCTTCAGTATATGGTTCCCTTGCATCTGTTCTAGCACAGTACTCACCTCAGCAATTAGCAGGGAAGAGAATTGGAG
TGTTTTCTTATGGTTCTGGTTTGGCTGCCACTCTGTACTCTCTTAAAGTCACACAAGATGCTACACCGGGTAAGTGCTGAATCTTTCAACAAGAATGTAT
TGAGAACTGAGTCCAGGCACAGTGGCTCACACCCGTAATCCCAGCAGTTTGGGAGGCCGAGGCGGGCAGATCACCTGAGGTCAGGAGTTCGAGACCAGTC
TGGCTAACATGGCTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCAGGTGAGGTGGTGCATGCCTGTAGTCCTAGCTACTTGGGAGGCTGAAGTA
GGAGAATCACTTGAATCCAGGAGAGGGAGGTTGTGGTGAGCCAAGATCACACCACTGTGCTCCAGCCTGGGTGACAGAGCGAGACTCTGTC
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.