| Potential function |
Interacting transcript |
Gene description |
Transcript biotype |
lncRNA id |
Alignment score (LAST) |
Alignment length |
Transcript region involved in interaction |
Genomic orientation of interacting RNAs |
|
|
ENST00000217185 |
protein tyrosine kinase 6 |
protein coding |
ENST00000508554 |
641 |
288 |
UTR3 |
Trans |
|
|
ENST00000227155 |
CD82 molecule |
protein coding |
ENST00000508554 |
688 |
308 |
UTR3 |
Trans |
|
|
ENST00000307792 |
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E |
protein coding |
ENST00000508554 |
684 |
288 |
UTR3 |
Trans |
|
|
ENST00000310045 |
dermatan sulfate epimerase-like |
protein coding |
ENST00000508554 |
660 |
308 |
UTR3 |
Trans |
|
|
ENST00000323816 |
growth arrest-specific 7 |
protein coding |
ENST00000508554 |
625 |
291 |
UTR3 |
Trans |
|
|
ENST00000327473 |
tumor necrosis factor, alpha-induced protein 8-like 1 |
protein coding |
ENST00000508554 |
672 |
297 |
UTR3 |
Trans |
|
|
ENST00000336787 |
RAB27A, member RAS oncogene family |
protein coding |
ENST00000508554 |
612 |
305 |
UTR3 |
Trans |
|
|
ENST00000378004 |
Rho GTPase activating protein 26 |
protein coding |
ENST00000508554 |
686 |
302 |
UTR3 |
Trans |
|
|
ENST00000396307 |
RAB27A, member RAS oncogene family |
protein coding |
ENST00000508554 |
612 |
305 |
UTR3 |
Trans |
|
|
ENST00000405000 |
pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 |
retained intron |
ENST00000508554 |
656 |
305 |
noncoding |
Trans |
|
|
ENST00000422247 |
centrosomal protein 135kDa |
protein coding |
ENST00000508554 |
679 |
278 |
UTR3 |
Trans |
|
|
ENST00000437099 |
growth arrest-specific 7 |
protein coding |
ENST00000508554 |
625 |
291 |
UTR3 |
Trans |
|
|
ENST00000439138 |
transmembrane protein 98 |
protein coding |
ENST00000508554 |
573 |
291 |
UTR5 |
Trans |
|
|
ENST00000477205 |
calcium/calmodulin-dependent protein kinase II gamma |
processed transcript |
ENST00000508554 |
678 |
288 |
noncoding |
Trans |
|
|
ENST00000482603 |
glyoxylate reductase/hydroxypyruvate reductase |
processed transcript |
ENST00000508554 |
586 |
299 |
noncoding |
Trans |
|
|
ENST00000513143 |
podoplanin |
protein coding |
ENST00000508554 |
567 |
291 |
UTR5 |
Trans |
|
|
ENST00000524750 |
CD82 molecule |
protein coding |
ENST00000508554 |
539 |
233 |
UTR3 |
Trans |
|
|
ENST00000542869 |
protein tyrosine kinase 6 |
protein coding |
ENST00000508554 |
658 |
309 |
UTR3 |
Trans |
|
|
ENST00000552918 |
spermatogenesis associated, serine-rich 2 |
protein coding |
ENST00000508554 |
616 |
281 |
UTR3 |
Trans |
|
|
ENST00000553127 |
spermatogenesis associated, serine-rich 2 |
protein coding |
ENST00000508554 |
632 |
289 |
UTR3 |
Trans |
|
|
ENST00000607772 |
CNKSR family member 3 |
protein coding |
ENST00000508554 |
558 |
305 |
UTR3 |
Trans |
|
|
ENST00000620139 |
melanoregulin |
protein coding |
ENST00000508554 |
625 |
306 |
UTR3 |
Trans |
|
|
TCONS_00001821 |
low density lipoprotein receptor adaptor protein 1 |
novel protein coding |
ENST00000508554 |
600 |
287 |
UTR3 |
Trans |
|
|
TCONS_00001823 |
low density lipoprotein receptor adaptor protein 1 |
novel protein coding |
ENST00000508554 |
600 |
287 |
UTR3 |
Trans |
|
|
TCONS_00004719 |
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 |
novel protein coding |
ENST00000508554 |
734 |
297 |
UTR3 |
Trans |
|
|
TCONS_00004721 |
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 |
novel protein coding |
ENST00000508554 |
734 |
297 |
UTR3 |
Trans |
|
|
TCONS_00011236 |
solute carrier family 35, member F3 |
novel protein coding |
ENST00000508554 |
669 |
289 |
UTR3 |
Trans |
|
|
TCONS_00020768 |
processed_transcript |
novel protein coding |
ENST00000508554 |
605 |
280 |
UTR5 |
Trans |
|
|
TCONS_00028040 |
ankyrin repeat domain 16 |
novel protein coding |
ENST00000508554 |
641 |
307 |
UTR3 |
Trans |
|
|
TCONS_00028040 |
ankyrin repeat domain 16 |
novel protein coding |
ENST00000508554 |
716 |
304 |
UTR3 |
Trans |
|
|
TCONS_00030130 |
calcium/calmodulin-dependent protein kinase II gamma |
novel protein coding |
ENST00000508554 |
816 |
302 |
UTR3 |
Trans |
|
|
TCONS_00030132 |
calcium/calmodulin-dependent protein kinase II gamma |
novel protein coding |
ENST00000508554 |
678 |
288 |
CDS_UTR |
Trans |
|
|
TCONS_00030588 |
cytoplasmic polyadenylation element binding protein 3 |
novel protein coding |
ENST00000508554 |
636 |
307 |
UTR3 |
Trans |
|
|
TCONS_00030588 |
cytoplasmic polyadenylation element binding protein 3 |
novel protein coding |
ENST00000508554 |
725 |
285 |
UTR3 |
Trans |
|
|
TCONS_00030591 |
cytoplasmic polyadenylation element binding protein 3 |
novel protein coding |
ENST00000508554 |
674 |
285 |
UTR3 |
Trans |
|
|
TCONS_00034642 |
CD82 molecule |
novel protein coding |
ENST00000508554 |
688 |
308 |
UTR3 |
Trans |
|
|
TCONS_00034643 |
CD82 molecule |
novel protein coding |
ENST00000508554 |
688 |
308 |
UTR3 |
Trans |
|
|
TCONS_00037377 |
NAD synthetase 1 |
novel protein coding |
ENST00000508554 |
716 |
304 |
UTR5 |
Trans |
|
|
TCONS_00039782 |
GRAM domain containing 1B |
novel protein coding |
ENST00000508554 |
636 |
292 |
UTR5 |
Trans |
|
|
TCONS_00039782 |
GRAM domain containing 1B |
novel protein coding |
ENST00000508554 |
716 |
286 |
UTR5 |
Trans |
|
|
TCONS_00041296 |
RIC3 acetylcholine receptor chaperone |
novel protein coding |
ENST00000508554 |
753 |
302 |
UTR3 |
Trans |
|
|
TCONS_00041298 |
RIC3 acetylcholine receptor chaperone |
novel protein coding |
ENST00000508554 |
753 |
302 |
UTR3 |
Trans |
|
|
TCONS_00046540 |
sestrin 3 |
novel protein coding |
ENST00000508554 |
652 |
311 |
UTR5 |
Trans |
|
|
TCONS_00050741 |
spermatogenesis associated, serine-rich 2 |
novel protein coding |
ENST00000508554 |
632 |
289 |
UTR3 |
Trans |
|
|
TCONS_00050741 |
spermatogenesis associated, serine-rich 2 |
novel protein coding |
ENST00000508554 |
727 |
297 |
UTR3 |
Trans |
|
|
TCONS_00050741 |
spermatogenesis associated, serine-rich 2 |
novel protein coding |
ENST00000508554 |
759 |
310 |
UTR3 |
Trans |
|
|
TCONS_00067572 |
DCN1, defective in cullin neddylation 1, domain containing 2 |
novel protein coding |
ENST00000508554 |
699 |
299 |
UTR3 |
Trans |
|
|
TCONS_00075813 |
forkhead box N3 |
novel protein coding |
ENST00000508554 |
655 |
283 |
UTR5 |
Trans |
|
|
TCONS_00075827 |
forkhead box N3 |
novel protein coding |
ENST00000508554 |
655 |
283 |
UTR3 |
Trans |
|
|
TCONS_00075834 |
forkhead box N3 |
novel protein coding |
ENST00000508554 |
678 |
289 |
UTR3 |
Trans |
|
|
TCONS_00075835 |
forkhead box N3 |
novel protein coding |
ENST00000508554 |
678 |
289 |
UTR3 |
Trans |
|
|
TCONS_00075917 |
ribosomal protein S6 kinase, 90kDa, polypeptide 5 |
novel noncoding |
ENST00000508554 |
732 |
278 |
noncoding |
Trans |
|
|
TCONS_00083866 |
RAB27A, member RAS oncogene family |
novel protein coding |
ENST00000508554 |
612 |
305 |
UTR3 |
Trans |
|
|
TCONS_00088441 |
antisense |
novel protein coding |
ENST00000508554 |
605 |
257 |
UTR5 |
Trans |
|
|
TCONS_00088780 |
synaptotagmin XVII |
novel protein coding |
ENST00000508554 |
628 |
305 |
UTR3 |
Trans |
|
|
TCONS_00095053 |
epithelial membrane protein 2 |
novel protein coding |
ENST00000508554 |
565 |
287 |
UTR3 |
Trans |
|
|
TCONS_00095053 |
epithelial membrane protein 2 |
novel protein coding |
ENST00000508554 |
617 |
290 |
UTR3 |
Trans |
|
|
TCONS_00101152 |
myosin phosphatase Rho interacting protein |
novel protein coding |
ENST00000508554 |
636 |
286 |
UTR5 |
Trans |
|
|
TCONS_00101169 |
myosin phosphatase Rho interacting protein |
novel protein coding |
ENST00000508554 |
636 |
286 |
UTR5 |
Trans |
|
|
TCONS_00107851 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
ENST00000508554 |
605 |
314 |
UTR5 |
Trans |
|
|
TCONS_00107864 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
ENST00000508554 |
623 |
295 |
UTR3 |
Trans |
|
|
TCONS_00107867 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
ENST00000508554 |
623 |
295 |
UTR3 |
Trans |
|
|
TCONS_00108999 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000508554 |
718 |
274 |
UTR5 |
Trans |
|
|
TCONS_00109000 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000508554 |
718 |
274 |
UTR5 |
Trans |
|
|
TCONS_00109009 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000508554 |
718 |
274 |
UTR5 |
Trans |
|
|
TCONS_00109011 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000508554 |
718 |
274 |
UTR5 |
Trans |
|
|
TCONS_00109012 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000508554 |
718 |
274 |
UTR5 |
Trans |
|
|
TCONS_00109013 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000508554 |
718 |
274 |
UTR5 |
Trans |
|
|
TCONS_00109014 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000508554 |
718 |
274 |
UTR5 |
Trans |
|
|
TCONS_00109427 |
serine hydroxymethyltransferase 1 (soluble) |
novel protein coding |
ENST00000508554 |
716 |
302 |
UTR3 |
Trans |
|
|
TCONS_00116668 |
desmoglein 3 |
novel protein coding |
ENST00000508554 |
692 |
312 |
UTR3 |
Trans |
|
|
TCONS_00116668 |
desmoglein 3 |
novel protein coding |
ENST00000508554 |
707 |
289 |
UTR3 |
Trans |
|
|
TCONS_00118919 |
potassium channel tetramerization domain containing 1 |
novel protein coding |
ENST00000508554 |
724 |
289 |
UTR3 |
Trans |
|
|
TCONS_00119049 |
GRB2 associated, regulator of MAPK1 |
novel protein coding |
ENST00000508554 |
703 |
275 |
UTR3 |
Trans |
|
|
TCONS_00133831 |
carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) |
novel protein coding |
ENST00000508554 |
672 |
305 |
UTR3 |
Trans |
|
|
TCONS_00135631 |
zinc finger protein 841 |
novel protein coding |
ENST00000508554 |
686 |
292 |
UTR3 |
Trans |
|
|
TCONS_00147093 |
ATPase family, AAA domain containing 2B |
novel protein coding |
ENST00000508554 |
610 |
290 |
UTR3 |
Trans |
|
|
TCONS_00147100 |
ATPase family, AAA domain containing 2B |
novel protein coding |
ENST00000508554 |
720 |
303 |
UTR3 |
Trans |
|
|
TCONS_00147113 |
ATPase family, AAA domain containing 2B |
novel protein coding |
ENST00000508554 |
720 |
303 |
UTR3 |
Trans |
|
|
TCONS_00147115 |
ATPase family, AAA domain containing 2B |
novel protein coding |
ENST00000508554 |
720 |
303 |
UTR3 |
Trans |
|
|
TCONS_00150599 |
four and a half LIM domains 2 |
novel protein coding |
ENST00000508554 |
649 |
284 |
UTR3 |
Trans |
|
|
TCONS_00150599 |
four and a half LIM domains 2 |
novel protein coding |
ENST00000508554 |
698 |
289 |
UTR3 |
Trans |
|
|
TCONS_00150696 |
septin 10 |
novel protein coding |
ENST00000508554 |
709 |
289 |
UTR3 |
Trans |
|
|
TCONS_00160920 |
protein tyrosine kinase 6 |
novel protein coding |
ENST00000508554 |
658 |
309 |
UTR3 |
Trans |
|
|
TCONS_00160924 |
protein tyrosine kinase 6 |
novel protein coding |
ENST00000508554 |
658 |
309 |
UTR3 |
Trans |
|
|
TCONS_00161482 |
BTB and CNC homology 1, basic leucine zipper transcription factor 1 |
novel protein coding |
ENST00000508554 |
605 |
290 |
UTR3 |
Trans |
|
|
TCONS_00165085 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
ENST00000508554 |
693 |
299 |
UTR3 |
Trans |
|
|
TCONS_00165085 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
ENST00000508554 |
756 |
311 |
UTR3 |
Trans |
|
|
TCONS_00165089 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
ENST00000508554 |
693 |
299 |
UTR3 |
Trans |
|
|
TCONS_00165089 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
ENST00000508554 |
756 |
311 |
UTR3 |
Trans |
|
|
TCONS_00165090 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
ENST00000508554 |
693 |
299 |
UTR3 |
Trans |
|
|
TCONS_00165090 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
ENST00000508554 |
756 |
311 |
UTR3 |
Trans |
|
|
TCONS_00165341 |
TTC28 antisense RNA 1 |
novel protein coding |
ENST00000508554 |
678 |
289 |
UTR5 |
Trans |
|
|
TCONS_00165341 |
TTC28 antisense RNA 1 |
novel protein coding |
ENST00000508554 |
722 |
289 |
UTR5 |
Trans |
|
|
TCONS_00182611 |
processed_transcript |
novel protein coding |
ENST00000508554 |
637 |
281 |
UTR3 |
Trans |
|
|
TCONS_00182613 |
processed_transcript |
novel protein coding |
ENST00000508554 |
637 |
281 |
UTR3 |
Trans |
|
|
TCONS_00182614 |
processed_transcript |
novel protein coding |
ENST00000508554 |
637 |
281 |
UTR3 |
Trans |
|
|
TCONS_00184373 |
neutral cholesterol ester hydrolase 1 |
novel protein coding |
ENST00000508554 |
739 |
289 |
UTR3 |
Trans |
|
|
TCONS_00185516 |
transcribed_unprocessed_pseudogene |
novel protein coding |
ENST00000508554 |
647 |
292 |
UTR5 |
Trans |
|
|
TCONS_00185519 |
transcribed_unprocessed_pseudogene |
novel protein coding |
ENST00000508554 |
647 |
292 |
UTR3 |
Trans |
|
|
TCONS_00190799 |
sorting nexin 25 |
novel protein coding |
ENST00000508554 |
695 |
289 |
UTR3 |
Trans |
|
|
TCONS_00190999 |
zinc finger protein 721 |
novel protein coding |
ENST00000508554 |
628 |
281 |
UTR3 |
Trans |
|
|
TCONS_00194652 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000508554 |
723 |
280 |
UTR5 |
Trans |
|
|
TCONS_00194655 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000508554 |
723 |
280 |
UTR5 |
Trans |
|
|
TCONS_00194655 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000508554 |
603 |
279 |
UTR3 |
Trans |
|
|
TCONS_00194655 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000508554 |
677 |
290 |
UTR3 |
Trans |
|
|
TCONS_00194655 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000508554 |
630 |
311 |
UTR3 |
Trans |
|
|
TCONS_00194682 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000508554 |
622 |
292 |
UTR3 |
Trans |
|
|
TCONS_00194682 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000508554 |
777 |
302 |
UTR3 |
Trans |
|
|
TCONS_00194686 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000508554 |
673 |
283 |
UTR3 |
Trans |
|
|
TCONS_00194686 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000508554 |
622 |
292 |
UTR3 |
Trans |
|
|
TCONS_00194686 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000508554 |
777 |
302 |
UTR3 |
Trans |
|
|
TCONS_00196475 |
F-box and leucine-rich repeat protein 7 |
novel protein coding |
ENST00000508554 |
634 |
297 |
UTR3 |
Trans |
|
|
TCONS_00203985 |
family with sequence similarity 169, member A |
novel protein coding |
ENST00000508554 |
624 |
301 |
UTR5 |
Trans |
|
|
TCONS_00219453 |
WD repeat domain 27 |
novel protein coding |
ENST00000508554 |
660 |
290 |
UTR3 |
Trans |
|
|
TCONS_00219453 |
WD repeat domain 27 |
novel protein coding |
ENST00000508554 |
778 |
308 |
UTR3 |
Trans |
|
|
TCONS_00234854 |
zinc finger and BTB domain containing 10 |
novel protein coding |
ENST00000508554 |
661 |
284 |
UTR3 |
Trans |
|
|
TCONS_00235281 |
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 |
novel protein coding |
ENST00000508554 |
615 |
303 |
UTR5 |
Trans |
|
|
TCONS_00235708 |
oxidation resistance 1 |
novel protein coding |
ENST00000508554 |
716 |
290 |
UTR3 |
Trans |
|
|
TCONS_00239255 |
tumor protein D52 |
novel protein coding |
ENST00000508554 |
692 |
300 |
UTR3 |
Trans |
|
|
TCONS_00245543 |
long intergenic non-protein coding RNA 963 |
novel protein coding |
ENST00000508554 |
708 |
290 |
UTR3 |
Trans |
|
|
TCONS_00247058 |
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 |
novel protein coding |
ENST00000508554 |
707 |
290 |
UTR3 |
Trans |
|
|
TCONS_00247576 |
contactin associated protein-like 3 |
novel protein coding |
ENST00000508554 |
686 |
284 |
UTR3 |
Trans |
|
|
TCONS_00247594 |
contactin associated protein-like 3 |
novel protein coding |
ENST00000508554 |
686 |
284 |
UTR3 |
Trans |
|
|
TCONS_00247617 |
unprocessed_pseudogene |
novel protein coding |
ENST00000508554 |
620 |
278 |
UTR5 |
Trans |
|
|
TCONS_00253752 |
queuine tRNA-ribosyltransferase 1 pseudogene 1 |
novel protein coding |
ENST00000508554 |
664 |
275 |
UTR3 |
Trans |